Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   M9H31_RS01620 Genome accession   NZ_CP134839
Coordinates   359677..360342 (+) Length   221 a.a.
NCBI ID   WP_002447011.1    Uniprot ID   -
Organism   Staphylococcus epidermidis strain ADQBK     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 354677..365342
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H31_RS01605 (M9H31_01605) - 356033..357577 (+) 1545 WP_002447008.1 NAD(P)H-binding protein -
  M9H31_RS01610 (M9H31_01610) - 357701..359170 (-) 1470 WP_002447009.1 alkaline phosphatase -
  M9H31_RS01615 (M9H31_01615) - 359467..359646 (+) 180 WP_002447010.1 hypothetical protein -
  M9H31_RS01620 (M9H31_01620) braR 359677..360342 (+) 666 WP_002447011.1 response regulator transcription factor Regulator
  M9H31_RS01625 (M9H31_01625) braS 360348..361244 (+) 897 WP_002447012.1 sensor histidine kinase Regulator
  M9H31_RS01630 (M9H31_01630) - 361355..362104 (+) 750 WP_002495981.1 ABC transporter ATP-binding protein -
  M9H31_RS01635 (M9H31_01635) - 362106..364118 (+) 2013 WP_002495980.1 FtsX-like permease family protein -
  M9H31_RS01640 (M9H31_01640) - 364222..364812 (+) 591 WP_002447015.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25643.77 Da        Isoelectric Point: 5.1924

>NTDB_id=884023 M9H31_RS01620 WP_002447011.1 359677..360342(+) (braR) [Staphylococcus epidermidis strain ADQBK]
MKIFIVEDDLVIAESLANELSKWNYEVHVIDNFEKIMEDFRRVEPQLVLLDINLPTLNGFHWCQEIRKVSRVPIMFISSR
TDNMDQILAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSIARDEIAVKGCKLIVDEAKLSKDNEHVQLSLTELQILK
LLFQNENKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDNLIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=884023 M9H31_RS01620 WP_002447011.1 359677..360342(+) (braR) [Staphylococcus epidermidis strain ADQBK]
ATGAAGATTTTCATTGTAGAAGACGATTTAGTGATTGCTGAAAGTTTAGCTAATGAGCTATCTAAATGGAATTATGAGGT
TCATGTGATTGATAATTTTGAAAAGATAATGGAAGATTTTCGCAGAGTAGAACCACAACTCGTATTATTAGATATCAATC
TACCAACCCTTAATGGCTTCCATTGGTGCCAAGAAATACGAAAAGTATCTCGTGTGCCTATTATGTTTATTAGTTCAAGA
ACAGATAATATGGATCAAATTCTGGCTATTCAAATGGGTGGCGATGATTTTATCGAGAAACCATTTAACTTGTCTTTAAC
AGTAGCTAAAATTCAGGCACTATTGCGTCGCACTTATGATTTATCAATAGCTCGTGATGAAATAGCTGTTAAAGGTTGTA
AACTAATTGTTGATGAGGCGAAGCTTAGCAAGGATAATGAACATGTTCAACTTTCCTTAACAGAGCTACAGATATTAAAA
TTGTTATTTCAAAATGAAAATAAATATGTAAGTCGTACAGCTTTAATTGAGAAATGTTGGGAGTCTGAGAATTTTATTGA
TGACAATACGCTAGCAGTAAATATGACGCGATTACGAAAAAAATTACTTTCTATCGGTGTCGATAATTTAATTGAGACAA
AGAAAAATGTAGGATACAGGGTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

78.733

100

0.787