Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   UXQ43_RS08710 Genome accession   NZ_CP151127
Coordinates   1813638..1814378 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BSN158     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1808638..1819378
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UXQ43_RS08685 (UXQ43_08685) hemH 1809515..1810438 (-) 924 WP_160190512.1 ferrochelatase -
  UXQ43_RS08690 (UXQ43_08690) hemE 1810495..1811532 (-) 1038 WP_000233540.1 uroporphyrinogen decarboxylase -
  UXQ43_RS08695 (UXQ43_08695) - 1811522..1811608 (-) 87 WP_031875110.1 hypothetical protein -
  UXQ43_RS08700 (UXQ43_08700) traP 1811794..1812297 (+) 504 WP_000737983.1 signal transduction protein TRAP -
  UXQ43_RS08705 (UXQ43_08705) - 1812422..1813645 (-) 1224 WP_001245753.1 ABC transporter permease -
  UXQ43_RS08710 (UXQ43_08710) pptA 1813638..1814378 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein Regulator
  UXQ43_RS08715 (UXQ43_08715) - 1814512..1814934 (+) 423 WP_000004985.1 HIT family protein -
  UXQ43_RS08720 (UXQ43_08720) - 1815076..1815441 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  UXQ43_RS08725 (UXQ43_08725) - 1816173..1816730 (+) 558 WP_000477957.1 DUF3267 domain-containing protein -
  UXQ43_RS08730 (UXQ43_08730) - 1816935..1817897 (+) 963 WP_000782119.1 foldase protein PrsA -
  UXQ43_RS08735 (UXQ43_08735) yhaM 1818018..1818959 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=884022 UXQ43_RS08710 WP_000216874.1 1813638..1814378(-) (pptA) [Staphylococcus aureus strain BSN158]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=884022 UXQ43_RS08710 WP_000216874.1 1813638..1814378(-) (pptA) [Staphylococcus aureus strain BSN158]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTAAATGGTGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATATACGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTTCTTGGCTTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACGTTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545