Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | M9H32_RS06510 | Genome accession | NZ_CP134832 |
| Coordinates | 1328869..1329843 (+) | Length | 324 a.a. |
| NCBI ID | WP_049427590.1 | Uniprot ID | - |
| Organism | Staphylococcus capitis strain ADQHB | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1323869..1334843
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9H32_RS06475 (M9H32_06475) | rpmG | 1324382..1324531 (+) | 150 | WP_002433802.1 | 50S ribosomal protein L33 | - |
| M9H32_RS06480 (M9H32_06480) | - | 1324680..1325231 (+) | 552 | WP_331245648.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| M9H32_RS06485 (M9H32_06485) | - | 1325232..1326695 (+) | 1464 | WP_064212364.1 | rhomboid family intramembrane serine protease | - |
| M9H32_RS06490 (M9H32_06490) | - | 1326676..1326879 (+) | 204 | WP_002433937.1 | YqgQ family protein | - |
| M9H32_RS06495 (M9H32_06495) | - | 1326876..1327862 (+) | 987 | WP_023350198.1 | ROK family glucokinase | - |
| M9H32_RS06500 (M9H32_06500) | - | 1327862..1328188 (+) | 327 | WP_002433945.1 | MTH1187 family thiamine-binding protein | - |
| M9H32_RS06505 (M9H32_06505) | - | 1328188..1328811 (+) | 624 | WP_023350199.1 | MBL fold metallo-hydrolase | - |
| M9H32_RS06510 (M9H32_06510) | comGA | 1328869..1329843 (+) | 975 | WP_049427590.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| M9H32_RS06515 (M9H32_06515) | comGB | 1329815..1330882 (+) | 1068 | WP_049427592.1 | competence type IV pilus assembly protein ComGB | - |
| M9H32_RS06520 (M9H32_06520) | comGC | 1330901..1331212 (+) | 312 | WP_029625707.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| M9H32_RS06525 (M9H32_06525) | comGD | 1331190..1331639 (+) | 450 | WP_162488576.1 | competence type IV pilus minor pilin ComGD | - |
| M9H32_RS06530 (M9H32_06530) | - | 1331626..1331925 (+) | 300 | WP_023350203.1 | hypothetical protein | - |
| M9H32_RS06535 (M9H32_06535) | comGF | 1331843..1332334 (+) | 492 | WP_049427594.1 | competence type IV pilus minor pilin ComGF | - |
| M9H32_RS06540 (M9H32_06540) | - | 1332495..1333013 (+) | 519 | WP_371106843.1 | shikimate kinase | - |
| M9H32_RS06545 (M9H32_06545) | gcvT | 1333222..1334313 (+) | 1092 | WP_049427596.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37028.86 Da Isoelectric Point: 7.7305
>NTDB_id=883972 M9H32_RS06510 WP_049427590.1 1328869..1329843(+) (comGA) [Staphylococcus capitis strain ADQHB]
MKMLFQEIVNYAIKHAASDIHFIPTEHHTLIKLRINDQLINYDTLAHAIYKKLLVYMKFKSGLDVSTQQLAQSGRYTYKL
QNMYYLRISTLPLSLGNESCVIRIVPQYFQQRRDSYEFKDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVMHAHQNLNLN
VISIEDPVEQLLDGITQISVNEKAGINYTNSIKAILRCDPDVILIGEIRDAYIAKCVIQASLSGHLVLTTLHANDCKGAL
LRLLEMGVTVQELCQSINLISNQRLITTQTNTRELVCEVMNQNQVEYFFEHNHELPNSFTKLATHLTNLSKEGVICEEVV
NKYT
MKMLFQEIVNYAIKHAASDIHFIPTEHHTLIKLRINDQLINYDTLAHAIYKKLLVYMKFKSGLDVSTQQLAQSGRYTYKL
QNMYYLRISTLPLSLGNESCVIRIVPQYFQQRRDSYEFKDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVMHAHQNLNLN
VISIEDPVEQLLDGITQISVNEKAGINYTNSIKAILRCDPDVILIGEIRDAYIAKCVIQASLSGHLVLTTLHANDCKGAL
LRLLEMGVTVQELCQSINLISNQRLITTQTNTRELVCEVMNQNQVEYFFEHNHELPNSFTKLATHLTNLSKEGVICEEVV
NKYT
Nucleotide
Download Length: 975 bp
>NTDB_id=883972 M9H32_RS06510 WP_049427590.1 1328869..1329843(+) (comGA) [Staphylococcus capitis strain ADQHB]
ATGAAAATGTTATTCCAAGAGATAGTTAATTATGCTATAAAGCACGCTGCAAGTGATATACATTTTATTCCTACTGAGCA
CCATACTTTAATTAAACTAAGAATCAACGATCAACTTATTAATTACGATACACTGGCACATGCTATTTACAAAAAGTTAC
TTGTTTATATGAAGTTCAAATCAGGCTTAGATGTTTCGACCCAACAGCTAGCCCAAAGTGGAAGATATACTTATAAATTG
CAAAATATGTATTACTTAAGAATCTCTACACTGCCTTTATCTTTAGGTAATGAAAGTTGCGTTATAAGAATCGTACCTCA
ATATTTCCAACAAAGACGTGACTCATATGAATTTAAAGATTTTAAGCACTTAATGAATAAAAAACAAGGATTATTACTTT
TTAGTGGTCCAACTGGCTCTGGGAAAAGCACTTTAATGTATCAAATGGTAATGCATGCCCATCAAAATTTAAATTTAAAT
GTTATTTCAATTGAAGATCCTGTTGAGCAATTATTAGATGGGATAACTCAAATTTCAGTTAATGAAAAGGCCGGAATAAA
TTATACTAACTCTATTAAAGCCATACTTAGATGTGACCCTGATGTCATTTTGATTGGAGAAATTCGTGATGCTTATATTG
CTAAATGTGTTATACAAGCAAGTCTAAGTGGTCATTTAGTGCTTACAACTTTACATGCCAATGATTGTAAAGGGGCTTTA
CTTCGTCTACTAGAAATGGGTGTAACAGTGCAAGAATTATGTCAATCTATAAATTTAATATCTAATCAAAGACTTATCAC
CACACAAACTAATACGCGTGAATTAGTTTGTGAAGTAATGAACCAAAATCAAGTAGAATACTTTTTTGAGCACAATCATG
AACTACCAAATAGCTTCACTAAGCTGGCTACACATCTAACTAATCTATCTAAGGAAGGGGTAATTTGTGAAGAGGTTGTT
AATAAGTATACTTAA
ATGAAAATGTTATTCCAAGAGATAGTTAATTATGCTATAAAGCACGCTGCAAGTGATATACATTTTATTCCTACTGAGCA
CCATACTTTAATTAAACTAAGAATCAACGATCAACTTATTAATTACGATACACTGGCACATGCTATTTACAAAAAGTTAC
TTGTTTATATGAAGTTCAAATCAGGCTTAGATGTTTCGACCCAACAGCTAGCCCAAAGTGGAAGATATACTTATAAATTG
CAAAATATGTATTACTTAAGAATCTCTACACTGCCTTTATCTTTAGGTAATGAAAGTTGCGTTATAAGAATCGTACCTCA
ATATTTCCAACAAAGACGTGACTCATATGAATTTAAAGATTTTAAGCACTTAATGAATAAAAAACAAGGATTATTACTTT
TTAGTGGTCCAACTGGCTCTGGGAAAAGCACTTTAATGTATCAAATGGTAATGCATGCCCATCAAAATTTAAATTTAAAT
GTTATTTCAATTGAAGATCCTGTTGAGCAATTATTAGATGGGATAACTCAAATTTCAGTTAATGAAAAGGCCGGAATAAA
TTATACTAACTCTATTAAAGCCATACTTAGATGTGACCCTGATGTCATTTTGATTGGAGAAATTCGTGATGCTTATATTG
CTAAATGTGTTATACAAGCAAGTCTAAGTGGTCATTTAGTGCTTACAACTTTACATGCCAATGATTGTAAAGGGGCTTTA
CTTCGTCTACTAGAAATGGGTGTAACAGTGCAAGAATTATGTCAATCTATAAATTTAATATCTAATCAAAGACTTATCAC
CACACAAACTAATACGCGTGAATTAGTTTGTGAAGTAATGAACCAAAATCAAGTAGAATACTTTTTTGAGCACAATCATG
AACTACCAAATAGCTTCACTAAGCTGGCTACACATCTAACTAATCTATCTAAGGAAGGGGTAATTTGTGAAGAGGTTGTT
AATAAGTATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
70.279 |
99.691 |
0.701 |
| comGA | Staphylococcus aureus N315 |
70.279 |
99.691 |
0.701 |