Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | M9H35_RS06015 | Genome accession | NZ_CP134823 |
| Coordinates | 1222931..1223905 (+) | Length | 324 a.a. |
| NCBI ID | WP_002453334.1 | Uniprot ID | - |
| Organism | Staphylococcus capitis strain ADJXA | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1217931..1228905
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9H35_RS05980 (M9H35_05980) | rpmG | 1218444..1218593 (+) | 150 | WP_002433802.1 | 50S ribosomal protein L33 | - |
| M9H35_RS05985 (M9H35_05985) | - | 1218742..1219293 (+) | 552 | WP_029625710.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| M9H35_RS05990 (M9H35_05990) | - | 1219294..1220757 (+) | 1464 | WP_331245878.1 | rhomboid family intramembrane serine protease | - |
| M9H35_RS05995 (M9H35_05995) | - | 1220738..1220941 (+) | 204 | WP_002453337.1 | YqgQ family protein | - |
| M9H35_RS06000 (M9H35_06000) | - | 1220938..1221924 (+) | 987 | WP_002453336.1 | ROK family glucokinase | - |
| M9H35_RS06005 (M9H35_06005) | - | 1221924..1222250 (+) | 327 | WP_002433945.1 | MTH1187 family thiamine-binding protein | - |
| M9H35_RS06010 (M9H35_06010) | - | 1222250..1222873 (+) | 624 | WP_002453335.1 | MBL fold metallo-hydrolase | - |
| M9H35_RS06015 (M9H35_06015) | comGA | 1222931..1223905 (+) | 975 | WP_002453334.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| M9H35_RS06020 (M9H35_06020) | comGB | 1223877..1224948 (+) | 1072 | Protein_1150 | competence type IV pilus assembly protein ComGB | - |
| M9H35_RS06025 (M9H35_06025) | comGC | 1224967..1225278 (+) | 312 | WP_029625707.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| M9H35_RS06030 (M9H35_06030) | comGD | 1225256..1225705 (+) | 450 | WP_121909863.1 | competence type IV pilus minor pilin ComGD | - |
| M9H35_RS06035 (M9H35_06035) | - | 1225692..1225991 (+) | 300 | WP_002453332.1 | hypothetical protein | - |
| M9H35_RS06040 (M9H35_06040) | comGF | 1225972..1226400 (+) | 429 | WP_331245879.1 | competence type IV pilus minor pilin ComGF | - |
| M9H35_RS06045 (M9H35_06045) | - | 1226570..1227079 (+) | 510 | WP_029625706.1 | shikimate kinase | - |
| M9H35_RS06050 (M9H35_06050) | gcvT | 1227288..1228379 (+) | 1092 | WP_016898186.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37118.93 Da Isoelectric Point: 7.7163
>NTDB_id=883903 M9H35_RS06015 WP_002453334.1 1222931..1223905(+) (comGA) [Staphylococcus capitis strain ADJXA]
MKMLFQEIVNYAIKHTASDIHFIPTEHHTLIKLRINDQLINYDTLAHAIYKKLLVYMKFKSGLDVSTQQLAQSGRYTYKL
QNMYYLRISTLPLSLGNESCVIRIVPQYFQQRRDSYEFKDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVMHAYQNLNLN
VISIEDPVEQLLDGITQISVNEKAGINYTNSFKAILRCDPDVILIGEIRDAYIAKCVIQASLSGHLVLTTLHANDCKGAL
LRLLEMGVTVQELCQSINLISNQRLITTQTNTRELVCEVMNQNQVEYFFEHNHELPNSFTKLATHLTNLSKEGVICEEVV
NKYT
MKMLFQEIVNYAIKHTASDIHFIPTEHHTLIKLRINDQLINYDTLAHAIYKKLLVYMKFKSGLDVSTQQLAQSGRYTYKL
QNMYYLRISTLPLSLGNESCVIRIVPQYFQQRRDSYEFKDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVMHAYQNLNLN
VISIEDPVEQLLDGITQISVNEKAGINYTNSFKAILRCDPDVILIGEIRDAYIAKCVIQASLSGHLVLTTLHANDCKGAL
LRLLEMGVTVQELCQSINLISNQRLITTQTNTRELVCEVMNQNQVEYFFEHNHELPNSFTKLATHLTNLSKEGVICEEVV
NKYT
Nucleotide
Download Length: 975 bp
>NTDB_id=883903 M9H35_RS06015 WP_002453334.1 1222931..1223905(+) (comGA) [Staphylococcus capitis strain ADJXA]
ATGAAAATGTTATTCCAAGAGATAGTTAATTATGCTATAAAGCACACTGCAAGTGATATACATTTTATTCCTACTGAGCA
CCATACTTTAATTAAACTAAGAATCAACGATCAACTTATTAATTACGATACACTGGCACATGCTATTTACAAAAAGTTAC
TTGTTTATATGAAGTTCAAATCAGGCTTAGATGTTTCGACCCAACAGCTAGCCCAAAGCGGAAGATATACTTATAAATTG
CAAAATATGTATTACTTAAGAATCTCTACGCTACCTTTATCTTTAGGTAATGAAAGTTGCGTTATAAGAATCGTACCTCA
ATATTTCCAACAAAGACGTGACTCATATGAATTTAAAGATTTTAAGCACTTAATGAATAAAAAACAAGGATTATTACTTT
TTAGTGGTCCAACTGGCTCTGGGAAAAGCACTTTAATGTATCAAATGGTAATGCATGCCTATCAAAATTTAAATTTAAAT
GTTATTTCAATTGAAGATCCTGTTGAGCAATTATTAGATGGGATAACTCAAATTTCAGTTAATGAAAAGGCCGGGATAAA
TTATACTAACTCTTTTAAAGCCATACTTAGATGTGACCCTGATGTCATTTTGATTGGAGAAATTCGTGATGCTTATATTG
CTAAATGTGTTATACAAGCAAGTCTAAGTGGTCATTTAGTGCTTACAACTTTACATGCTAATGATTGTAAAGGGGCTTTA
CTTCGTCTACTAGAAATGGGTGTTACAGTGCAAGAATTATGTCAATCTATAAATTTAATATCTAATCAAAGACTTATCAC
CACACAAACTAATACGCGTGAATTAGTTTGTGAAGTAATGAACCAAAATCAAGTAGAATACTTTTTTGAACACAATCATG
AACTACCAAATAGCTTCACTAAGCTGGCTACACATCTAACTAATCTTTCTAAGGAAGGAGTAATTTGTGAAGAGGTTGTT
AATAAGTATACTTAA
ATGAAAATGTTATTCCAAGAGATAGTTAATTATGCTATAAAGCACACTGCAAGTGATATACATTTTATTCCTACTGAGCA
CCATACTTTAATTAAACTAAGAATCAACGATCAACTTATTAATTACGATACACTGGCACATGCTATTTACAAAAAGTTAC
TTGTTTATATGAAGTTCAAATCAGGCTTAGATGTTTCGACCCAACAGCTAGCCCAAAGCGGAAGATATACTTATAAATTG
CAAAATATGTATTACTTAAGAATCTCTACGCTACCTTTATCTTTAGGTAATGAAAGTTGCGTTATAAGAATCGTACCTCA
ATATTTCCAACAAAGACGTGACTCATATGAATTTAAAGATTTTAAGCACTTAATGAATAAAAAACAAGGATTATTACTTT
TTAGTGGTCCAACTGGCTCTGGGAAAAGCACTTTAATGTATCAAATGGTAATGCATGCCTATCAAAATTTAAATTTAAAT
GTTATTTCAATTGAAGATCCTGTTGAGCAATTATTAGATGGGATAACTCAAATTTCAGTTAATGAAAAGGCCGGGATAAA
TTATACTAACTCTTTTAAAGCCATACTTAGATGTGACCCTGATGTCATTTTGATTGGAGAAATTCGTGATGCTTATATTG
CTAAATGTGTTATACAAGCAAGTCTAAGTGGTCATTTAGTGCTTACAACTTTACATGCTAATGATTGTAAAGGGGCTTTA
CTTCGTCTACTAGAAATGGGTGTTACAGTGCAAGAATTATGTCAATCTATAAATTTAATATCTAATCAAAGACTTATCAC
CACACAAACTAATACGCGTGAATTAGTTTGTGAAGTAATGAACCAAAATCAAGTAGAATACTTTTTTGAACACAATCATG
AACTACCAAATAGCTTCACTAAGCTGGCTACACATCTAACTAATCTTTCTAAGGAAGGAGTAATTTGTGAAGAGGTTGTT
AATAAGTATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
70.588 |
99.691 |
0.704 |
| comGA | Staphylococcus aureus N315 |
70.588 |
99.691 |
0.704 |