Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   M9H35_RS01145 Genome accession   NZ_CP134823
Coordinates   256774..257439 (+) Length   221 a.a.
NCBI ID   WP_049390646.1    Uniprot ID   -
Organism   Staphylococcus capitis strain ADJXA     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 251774..262439
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H35_RS01120 (M9H35_01120) - 251861..252487 (-) 627 WP_049390647.1 FMN-dependent NADH-azoreductase -
  M9H35_RS01125 (M9H35_01125) - 252758..252859 (+) 102 WP_016898541.1 SE2200 family small protein -
  M9H35_RS01130 (M9H35_01130) - 253044..254586 (+) 1543 Protein_220 NAD(P)H-binding protein -
  M9H35_RS01135 (M9H35_01135) - 254780..256264 (-) 1485 WP_002454130.1 alkaline phosphatase -
  M9H35_RS01140 (M9H35_01140) - 256591..256743 (+) 153 WP_002436229.1 hypothetical protein -
  M9H35_RS01145 (M9H35_01145) braR 256774..257439 (+) 666 WP_049390646.1 response regulator transcription factor Regulator
  M9H35_RS01150 (M9H35_01150) braS 257445..258341 (+) 897 WP_002454129.1 sensor histidine kinase Regulator
  M9H35_RS01155 (M9H35_01155) - 258451..259200 (+) 750 WP_002436183.1 ABC transporter ATP-binding protein -
  M9H35_RS01160 (M9H35_01160) - 259184..261217 (+) 2034 WP_222129146.1 ABC transporter permease -
  M9H35_RS01165 (M9H35_01165) - 261441..262259 (+) 819 WP_064262697.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25576.40 Da        Isoelectric Point: 4.2753

>NTDB_id=883887 M9H35_RS01145 WP_049390646.1 256774..257439(+) (braR) [Staphylococcus capitis strain ADJXA]
MKILIVEDDLVIAESLANELSKWNYEVNVVENFDQIMEDFRETEPQLVLLDINLPTLNGFHWCQEMRKESNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSVSNDELDVKDCKLILDEAKLVKDDDAVQLSLTELQILK
MLFQNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDDFIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=883887 M9H35_RS01145 WP_049390646.1 256774..257439(+) (braR) [Staphylococcus capitis strain ADJXA]
ATGAAGATTCTCATAGTCGAAGATGATTTAGTTATTGCTGAGAGCTTGGCTAATGAACTTTCAAAATGGAATTATGAAGT
GAATGTTGTTGAAAACTTTGATCAAATTATGGAAGATTTTCGTGAAACAGAACCACAACTAGTATTATTAGATATCAACT
TACCTACACTCAATGGATTTCATTGGTGCCAAGAAATGCGCAAAGAATCTAATGTTCCTATCATGTTTATTAGTTCGAGA
ACTGATAATATGGATCAAATTATGGCTATTCAAATGGGTGGCGATGACTTTATTGAGAAACCATTCAATTTATCGCTAAC
AGTAGCGAAGATACAAGCGTTACTTCGCCGTACATACGATTTATCCGTATCAAATGATGAATTAGATGTGAAAGATTGCA
AGTTGATTCTCGATGAGGCGAAACTCGTAAAGGATGATGATGCTGTTCAATTGTCATTAACAGAACTTCAAATTTTGAAA
ATGTTATTCCAAAATGAAGGAAAATACGTGAGTCGTACAGCATTAATTGAAAAGTGTTGGGAATCTGAAAACTTTATTGA
TGACAATACCTTAGCAGTTAATATGACTAGATTACGCAAGAAGTTATTATCTATAGGCGTTGATGATTTTATTGAAACTA
AGAAAAATGTCGGATATAGGGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

82.805

100

0.828