Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   RNT94_RS07115 Genome accession   NZ_CP134803
Coordinates   1447976..1449019 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain SA85_2     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1442976..1454019
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RNT94_RS07085 - 1443397..1444653 (-) 1257 WP_001793428.1 aminopeptidase -
  RNT94_RS07090 - 1444656..1444856 (-) 201 WP_000180460.1 DUF1128 family protein -
  RNT94_RS07095 - 1445003..1445467 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  RNT94_RS07100 - 1445474..1445749 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  RNT94_RS07105 - 1446027..1447244 (+) 1218 WP_000037081.1 YihY/virulence factor BrkB family protein -
  RNT94_RS07110 vraR 1447357..1447986 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  RNT94_RS07115 vraS 1447976..1449019 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  RNT94_RS07120 liaF 1449016..1449717 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  RNT94_RS07125 - 1449732..1450118 (-) 387 WP_001110182.1 hypothetical protein -
  RNT94_RS07130 map 1450335..1451093 (-) 759 WP_000636145.1 type I methionyl aminopeptidase -
  RNT94_RS07135 - 1451677..1452663 (+) 987 WP_000999712.1 aromatic acid exporter family protein -
  RNT94_RS07140 - 1452852..1453265 (-) 414 WP_025174370.1 hypothetical protein -
  RNT94_RS07145 - 1453294..1453404 (-) 111 WP_014937049.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=883827 RNT94_RS07115 WP_001017131.1 1447976..1449019(-) (vraS) [Staphylococcus aureus strain SA85_2]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=883827 RNT94_RS07115 WP_001017131.1 1447976..1449019(-) (vraS) [Staphylococcus aureus strain SA85_2]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTTCTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAATTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAATTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGCTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1