Detailed information NTG0883748

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: RI132_RS13355
• Genome accession: NZ_CP134783
• Coordinates: 2888222..2889229 (+)
• Length: 335 a.a.
• NCBI ID: WP_011079334.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain GCU-01
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2883222..2894229

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RI132_RS13335 (RI132_13335)	metJ	2883327..2883644 (+)	318	WP_011079338.1	met regulon transcriptional regulator MetJ	-
RI132_RS13340 (RI132_13340)	-	2883731..2885008 (-)	1278	WP_011079337.1	malic enzyme-like NAD(P)-binding protein	-
RI132_RS13345 (RI132_13345)	rpmE	2885287..2885508 (-)	222	WP_011151292.1	50S ribosomal protein L31	-
RI132_RS13350 (RI132_13350)	priA	2885789..2887993 (+)	2205	WP_047112235.1	primosomal protein N'	-
RI132_RS13355 (RI132_13355)	cytR	2888222..2889229 (+)	1008	WP_011079334.1	DNA-binding transcriptional regulator CytR	Regulator
RI132_RS13360 (RI132_13360)	-	2889339..2889896 (+)	558	WP_047112233.1	SPOR domain-containing protein	-
RI132_RS13365 (RI132_13365)	hslV	2890047..2890601 (+)	555	WP_017419639.1	ATP-dependent protease subunit HslV	-
RI132_RS13370 (RI132_13370)	hslU	2890629..2891960 (+)	1332	WP_072615934.1	HslU--HslV peptidase ATPase subunit	-
RI132_RS13375 (RI132_13375)	-	2892126..2893043 (+)	918	WP_072615933.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
RI132_RS13380 (RI132_13380)	rraA	2893119..2893640 (+)	522	WP_011079329.1	ribonuclease E activity regulator RraA	-
RI132_RS13385 (RI132_13385)	zapB	2893862..2894104 (+)	243	WP_011079328.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36842.38 Da
• Isoelectric Point: 6.4904

>NTDB_id=883748 RI132_RS13355 WP_011079334.1 2888222..2889229(+) (cytR) [Vibrio vulnificus strain GCU-01]
MATMKDVAQLAGVSTATVSRALMNPDKVSATTRKRVEDAVLEAGYSPNSLARNLRRNESRTIVAIVPDICDPYYTEIIRG
IEDAAIEQGYLVLLGDSGQQKRRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPDLELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPKSAALCQFRQQGYQQALRRAGITMNPQYCVESEFSFEGGAKAIRHLLEMNDAPTA
VFCHCDTMAIGAIQEAKKLGFRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDIHSGSRLLE
TKLVVRGSAAPPGLR

Nucleotide

• Length: 1008 bp

>NTDB_id=883748 RI132_RS13355 WP_011079334.1 2888222..2889229(+) (cytR) [Vibrio vulnificus strain GCU-01]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGAGTTTCAACGGCAACGGTTTCGAGAGCGCTGATGAATCCAGACAA
AGTATCCGCCACAACGCGTAAGCGTGTGGAAGATGCGGTGTTGGAAGCTGGTTATTCCCCAAATTCGCTGGCACGCAATT
TACGCCGCAACGAGTCACGCACTATCGTCGCGATCGTTCCTGACATTTGTGATCCTTACTACACAGAGATCATTCGTGGC
ATTGAAGATGCCGCCATTGAACAGGGATATTTGGTTCTACTCGGTGACAGCGGCCAACAAAAGCGCCGTGAAAGCTCACT
CGTCAATCTCGTTTTTACCAAGCAAGCGGATGGTATGCTGTTGCTCGGTACCGACTTACCGTTTGATGTGAGCAAGCCAG
AACAGAAAAATCTTCCTCCGATGGTCATGGCTTGCGAGTTCGCCCCCGATCTCGAACTGCCGACGGTTCATATCGATAAC
TTGACCTCAGCATTTGAAGCGGTGAACTACCTGACCCAATTGGGCCACAAACGCATCGCCCAAATTTCAGGGCCAAAATC
CGCAGCACTTTGTCAGTTTAGACAACAAGGCTATCAACAAGCTTTGCGCCGTGCAGGCATCACAATGAACCCACAATACT
GTGTTGAGTCTGAGTTCTCTTTTGAAGGTGGGGCGAAAGCGATCCGTCATCTGCTAGAAATGAATGACGCGCCAACCGCC
GTTTTCTGCCATTGTGACACTATGGCTATCGGGGCGATTCAAGAAGCGAAAAAATTGGGCTTCCGAGTACCGCAAGATCT
GTCGATTGTCGGCTTCGATGACATTCAGTTTGCCCAATATTGCGATCCTCCGCTAACCACCATCTCACAGCCACGCTATG
AGATTGGTCGTCAAGCGATGCTGATGATGTTAGAGCTGCTGAAAGGACATGACATTCACAGTGGCTCACGCTTACTTGAA
ACCAAATTGGTGGTTCGTGGTAGCGCAGCGCCTCCGGGCTTACGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	89.759	99.104	0.89
cytR	Vibrio cholerae C6706	88.253	99.104	0.875