Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   RNI18_RS05285 Genome accession   NZ_CP134775
Coordinates   1116801..1117457 (-) Length   218 a.a.
NCBI ID   WP_046559486.1    Uniprot ID   -
Organism   Bacillus velezensis strain KB21     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1111801..1122457
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RNI18_RS05265 (RNI18_05265) spxH 1112040..1112942 (+) 903 WP_024085126.1 protease adaptor protein SpxH -
  RNI18_RS05270 (RNI18_05270) - 1113228..1113395 (+) 168 WP_003155026.1 hypothetical protein -
  RNI18_RS05275 (RNI18_05275) pepF 1113433..1115262 (-) 1830 WP_088005489.1 oligoendopeptidase F Regulator
  RNI18_RS05280 (RNI18_05280) - 1115490..1116650 (-) 1161 WP_046559487.1 competence protein CoiA family protein -
  RNI18_RS05285 (RNI18_05285) mecA 1116801..1117457 (-) 657 WP_046559486.1 adaptor protein MecA Regulator
  RNI18_RS05290 (RNI18_05290) - 1117440..1117550 (-) 111 Protein_1053 adaptor protein MecA -
  RNI18_RS05295 (RNI18_05295) - 1117733..1118389 (+) 657 WP_003155033.1 TerC family protein -
  RNI18_RS05300 (RNI18_05300) spx 1118447..1118842 (-) 396 WP_003155034.1 transcriptional regulator Spx -
  RNI18_RS05305 (RNI18_05305) - 1119021..1119599 (-) 579 WP_003155035.1 GNAT family N-acetyltransferase -
  RNI18_RS05310 (RNI18_05310) - 1119717..1120904 (-) 1188 WP_003155036.1 putative glycoside hydrolase -
  RNI18_RS05315 (RNI18_05315) oppF 1121011..1121928 (-) 918 WP_003155037.1 oligopeptide ABC transporter ATP-binding protein OppF -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25990.79 Da        Isoelectric Point: 4.1143

>NTDB_id=883561 RNI18_RS05285 WP_046559486.1 1116801..1117457(-) (mecA) [Bacillus velezensis strain KB21]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFPS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=883561 RNI18_RS05285 WP_046559486.1 1116801..1117457(-) (mecA) [Bacillus velezensis strain KB21]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTCCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

88.991

100

0.89