Detailed information NTG0883502

Bioinformatically predicted

Overview

• Name: pilS
• Type: Regulator
• Locus tag: RMV19_RS04195
• Genome accession: NZ_CP134773
• Coordinates: 898913..900502 (-)
• Length: 529 a.a.
• NCBI ID: WP_311883407.1
• Uniprot ID: -
• Organism: Pseudomonas sp. VD-NE white
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 893913..905502

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RMV19_RS04180	-	895889..896290 (+)	402	WP_093434831.1	type IV pilin protein	-
RMV19_RS04185	thiO	896347..897447 (+)	1101	WP_311883411.1	glycine oxidase ThiO	-
RMV19_RS04190	pilR	897570..898916 (-)	1347	WP_108227016.1	sigma-54 dependent transcriptional regulator	Regulator
RMV19_RS04195	pilS	898913..900502 (-)	1590	WP_311883407.1	ATP-binding protein	Regulator
RMV19_RS04200	-	900492..900734 (-)	243	WP_034153864.1	PP0621 family protein	-
RMV19_RS04205	-	900861..901877 (-)	1017	WP_007909854.1	outer membrane protein assembly factor BamD	-
RMV19_RS04210	rluD	902029..902991 (+)	963	WP_034153865.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
RMV19_RS04215	pgeF	902988..903710 (+)	723	WP_311883403.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 529 a.a.
• Molecular weight: 58657.34 Da
• Isoelectric Point: 6.5047

>NTDB_id=883502 RMV19_RS04195 WP_311883407.1 898913..900502(-) (pilS) [Pseudomonas sp. VD-NE white]
MIAEATHADSKQAQRLLRLYHLYRLSVGITLVLLISSNMDNRLLTSANDELLRGGSWLYLVLNILLVVFLENPRRPAQLF
SLALVDVLLLCGLFYAAGGVASALGNLLIVSVAISNTLLRRRIGLLIAAIGALGIVALSFLLSFSHPLSANEYLQAGTLG
ALCFAASLLVQGLIRRLEVSEILAERRASEVVGLEALNALILQRMRTGILVLDEERRVQLANHSAQTLLAQTHLQGHLID
EYSTALVDRLQLWMNNPTLRPQSLKIPGNGLELQPNFIALEQSPNQQTLVFLEDLAQVAQQAQQLKLAALGRLTAGISHE
IRNPLGAISHAAQLLAESEELDSADRRLTQIIQDHSQRMNRVIENVLQLSRRQQSAPQRLDLKPWLENFVAESREQASER
QQIHLRINSGEFITLMDPNQLTQILDNLLRNGWRHSALLHDQAEVWLALFTDADSQLAVLEVQDNGPGVPADEQTHLFEP
FFTTSSQGTGLGLYLSRELCESNQARLDFQSRQGGGCFRITFAHGRKQS

Nucleotide

• Length: 1590 bp

>NTDB_id=883502 RMV19_RS04195 WP_311883407.1 898913..900502(-) (pilS) [Pseudomonas sp. VD-NE white]
GTGATCGCTGAGGCCACCCACGCCGACAGCAAACAGGCGCAGCGCCTGCTGCGCCTCTACCATCTCTACCGTTTAAGCGT
CGGCATCACCCTGGTGTTGCTGATCTCCAGCAACATGGACAACCGCCTGCTGACGTCGGCCAATGACGAATTGCTGCGCG
GCGGCAGTTGGCTGTACCTCGTTCTCAACATCCTGCTCGTGGTCTTTCTTGAAAACCCCCGACGCCCGGCCCAGTTGTTC
AGCCTGGCGCTGGTCGATGTGCTGTTGCTGTGCGGCCTGTTCTATGCGGCCGGTGGCGTCGCCAGTGCCCTCGGCAACTT
GCTGATTGTCTCGGTGGCGATCAGCAATACCTTGCTGCGTCGTCGAATTGGTCTGTTGATCGCCGCGATCGGCGCTCTGG
GCATCGTCGCCTTGAGCTTTCTGCTGAGCTTCAGCCACCCTCTGAGCGCCAATGAATACTTGCAGGCCGGCACCCTCGGC
GCGCTGTGCTTTGCCGCGTCGTTGTTGGTGCAAGGCTTGATTCGTCGCCTGGAGGTCAGCGAAATCCTGGCTGAGCGCCG
TGCCAGCGAGGTGGTGGGGCTTGAAGCCCTCAACGCGCTGATCCTGCAACGCATGCGCACCGGCATTCTGGTCCTCGACG
AGGAGCGCCGGGTGCAACTGGCCAACCACAGCGCCCAGACGCTACTGGCGCAAACGCATCTCCAAGGTCATTTGATCGAC
GAGTATTCGACGGCGTTGGTCGATCGCCTGCAACTGTGGATGAACAACCCGACCCTGCGCCCGCAAAGCCTGAAAATCCC
CGGCAACGGCCTCGAACTGCAGCCGAACTTCATCGCTCTGGAGCAGAGTCCGAACCAGCAAACCCTGGTCTTTCTCGAAG
ATCTGGCGCAAGTCGCGCAACAAGCCCAACAACTCAAACTCGCCGCGCTCGGACGCCTGACCGCCGGCATCTCCCACGAA
ATTCGCAATCCGCTGGGCGCCATCAGTCATGCCGCGCAGCTATTGGCCGAGTCCGAGGAACTCGACAGCGCCGATCGACG
TCTGACGCAGATCATTCAAGACCACTCTCAGCGCATGAACCGAGTCATCGAAAACGTCCTGCAACTGTCCCGCCGCCAGC
AAAGTGCACCGCAACGCCTGGATCTCAAGCCATGGCTGGAAAACTTCGTTGCCGAAAGCCGCGAACAGGCCAGCGAGCGC
CAGCAGATTCATCTGCGGATCAACTCGGGGGAGTTCATCACGCTGATGGACCCCAACCAGCTCACGCAAATTCTCGACAA
CCTGTTACGCAACGGCTGGCGCCACAGCGCCCTGTTGCACGATCAGGCCGAAGTCTGGCTGGCCCTGTTCACCGATGCCG
ACAGCCAGTTGGCGGTCCTCGAAGTGCAGGATAACGGCCCCGGCGTCCCGGCCGATGAGCAGACTCATCTGTTCGAACCG
TTTTTCACCACCAGCAGCCAAGGCACCGGCCTTGGGCTTTATCTGTCCCGTGAGCTGTGCGAAAGCAACCAAGCGCGCCT
AGACTTCCAATCACGCCAAGGCGGCGGCTGCTTTCGCATCACCTTTGCTCACGGACGGAAACAAAGTTGA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (309-374)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (417-521)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilS	Pseudomonas aeruginosa PAK	59.434	100	0.595