Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RMA73_RS17100 Genome accession   NZ_CP134704
Coordinates   3837696..3838097 (+) Length   133 a.a.
NCBI ID   WP_003472648.1    Uniprot ID   A0A6N7QCN8
Organism   Xanthomonas translucens pv. translucens strain CO236     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3832696..3843097
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RMA73_RS17085 (RMA73_17130) - 3834089..3835233 (+) 1145 WP_153476652.1 IS3 family transposase -
  RMA73_RS17090 (RMA73_17135) - 3835624..3836505 (-) 882 WP_058360951.1 energy transducer TonB -
  RMA73_RS17095 (RMA73_17140) gshB 3836502..3837452 (-) 951 WP_003478898.1 glutathione synthase -
  RMA73_RS17100 (RMA73_17145) pilG 3837696..3838097 (+) 402 WP_003472648.1 twitching motility response regulator PilG Regulator
  RMA73_RS17105 (RMA73_17150) - 3838114..3838476 (+) 363 WP_003472647.1 response regulator -
  RMA73_RS17110 (RMA73_17155) - 3838478..3839008 (+) 531 WP_058360952.1 chemotaxis protein CheW -
  RMA73_RS17115 (RMA73_17160) - 3839049..3841085 (+) 2037 WP_058360953.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14643.95 Da        Isoelectric Point: 6.3483

>NTDB_id=883011 RMA73_RS17100 WP_003472648.1 3837696..3838097(+) (pilG) [Xanthomonas translucens pv. translucens strain CO236]
MSENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=883011 RMA73_RS17100 WP_003472648.1 3837696..3838097(+) (pilG) [Xanthomonas translucens pv. translucens strain CO236]
ATGAGTGAAAACACGACTGCGGGTGGGGAACTCGCAGGACTGAGAGTGATGGTGATCGATGACTCGAAGACGATCCGCCG
CACCGCCGAAACGCTGTTGAAGCGCGAAGGCTGCGAGGTGGTCACTGCCACCGACGGCTTCGAGGCCCTGGCCAAGATCG
CCGATCAGCAACCGCAGATCATCTTCGTGGACATCATGATGCCGCGGCTGGACGGCTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCCACGCCGGTGATCATGTTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGGCGCAT
CGTCGGTTCCGAGCAGTACCTCACCAAACCCTTCACACGCGAAGAGCTGTTGGGCGCGATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N7QCN8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677