Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RMA82_RS15965 Genome accession   NZ_CP134702
Coordinates   3699705..3700106 (+) Length   133 a.a.
NCBI ID   WP_003472648.1    Uniprot ID   A0A6N7QCN8
Organism   Xanthomonas translucens pv. undulosa strain CO237     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3694705..3705106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RMA82_RS15955 (RMA82_15955) - 3697633..3698514 (-) 882 WP_047324630.1 energy transducer TonB -
  RMA82_RS15960 (RMA82_15960) gshB 3698511..3699461 (-) 951 WP_003472649.1 glutathione synthase -
  RMA82_RS15965 (RMA82_15965) pilG 3699705..3700106 (+) 402 WP_003472648.1 twitching motility response regulator PilG Regulator
  RMA82_RS15970 (RMA82_15970) - 3700123..3700485 (+) 363 WP_003472647.1 response regulator -
  RMA82_RS15975 (RMA82_15975) - 3700487..3701017 (+) 531 WP_003472644.1 chemotaxis protein CheW -
  RMA82_RS15980 (RMA82_15980) - 3701058..3703094 (+) 2037 WP_047324631.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14643.95 Da        Isoelectric Point: 6.3483

>NTDB_id=882997 RMA82_RS15965 WP_003472648.1 3699705..3700106(+) (pilG) [Xanthomonas translucens pv. undulosa strain CO237]
MSENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=882997 RMA82_RS15965 WP_003472648.1 3699705..3700106(+) (pilG) [Xanthomonas translucens pv. undulosa strain CO237]
ATGAGTGAAAACACGACTGCGGGTGGGGAACTCGCAGGACTGAGAGTCATGGTGATCGATGACTCGAAGACCATCCGCCG
CACCGCCGAAACGCTGTTGAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAGGCCCTGGCCAAGATCG
CCGATCAGCAACCGCAGATCATCTTCGTGGACATCATGATGCCGCGGCTGGACGGCTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACGCCGGTAATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGGCGCAT
CGTCGGTTCCGAGCAGTACCTCACCAAGCCCTTCACACGTGAAGAGCTGCTGGGCGCGATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N7QCN8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677