Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RLE12_RS02315 Genome accession   NZ_CP134695
Coordinates   516453..516860 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain TJM4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 511453..521860
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RLE12_RS02285 - 511501..512505 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  RLE12_RS02290 pyrR 512529..513041 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  RLE12_RS02295 ruvX 513153..513587 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  RLE12_RS02300 - 513587..514156 (-) 570 WP_003100947.1 YqgE/AlgH family protein -
  RLE12_RS02305 - 514205..515098 (-) 894 WP_003084580.1 TonB family protein -
  RLE12_RS02310 gshB 515245..516198 (-) 954 WP_003100943.1 glutathione synthase -
  RLE12_RS02315 pilG 516453..516860 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  RLE12_RS02320 pilH 516907..517272 (+) 366 WP_003084587.1 twitching motility response regulator PilH -
  RLE12_RS02325 - 517323..517859 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  RLE12_RS02330 pilJ 517944..519992 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  RLE12_RS02335 pilK 520053..520928 (+) 876 WP_004352088.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=882928 RLE12_RS02315 WP_003084583.1 516453..516860(+) (pilG) [Pseudomonas aeruginosa strain TJM4]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=882928 RLE12_RS02315 WP_003084583.1 516453..516860(+) (pilG) [Pseudomonas aeruginosa strain TJM4]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCACTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385