Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   RIL75_RS10425 Genome accession   NZ_CP134674
Coordinates   2216760..2217386 (+) Length   208 a.a.
NCBI ID   WP_013097255.1    Uniprot ID   A0A427KI93
Organism   Enterobacter cloacae strain 99183042147     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2211760..2222386
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RIL75_RS10405 (RIL75_10405) - 2212162..2213922 (-) 1761 WP_095455500.1 Lon protease family protein -
  RIL75_RS10410 (RIL75_10410) matP 2214109..2214561 (+) 453 WP_013097258.1 macrodomain Ter protein MatP -
  RIL75_RS10415 (RIL75_10415) ompA 2214626..2215678 (-) 1053 WP_118283100.1 porin OmpA -
  RIL75_RS10420 (RIL75_10420) sulA 2216033..2216542 (-) 510 WP_095455501.1 SOS-induced cell division inhibitor SulA -
  RIL75_RS10425 (RIL75_10425) sxy/tfoX 2216760..2217386 (+) 627 WP_013097255.1 TfoX/Sxy family DNA transformation protein Regulator
  RIL75_RS10430 (RIL75_10430) yccS 2217343..2219505 (-) 2163 WP_014831317.1 YccS family putative transporter -
  RIL75_RS10435 (RIL75_10435) - 2219525..2219971 (-) 447 WP_014831318.1 YccF domain-containing protein -
  RIL75_RS10440 (RIL75_10440) helD 2220094..2222148 (+) 2055 WP_046888174.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24000.57 Da        Isoelectric Point: 9.2254

>NTDB_id=882699 RIL75_RS10425 WP_013097255.1 2216760..2217386(+) (sxy/tfoX) [Enterobacter cloacae strain 99183042147]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEESAKYCVKNGSSFLTLMKRGRPILLN
YYRVDDGLWQDRERLLQLSSYALNAARKERIQRYQRNRLKDLPNLTFQLEVLLCEAGITNEDTLRSLGARTSWLKLRAKN
KALSIKVLFALEGAIEGLHEAALPAEIRRELTEWFNALPEPQENRSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=882699 RIL75_RS10425 WP_013097255.1 2216760..2217386(+) (sxy/tfoX) [Enterobacter cloacae strain 99183042147]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCTCCATTAGGAGAAATTCATCATCGTGCGCT
TTTTGGTGGCTATACCCTGGCCGTCGATGAAGCGGTGTTTGCCATGGTGTCAGACGGTGAGCTTTACCTTCGCGCCTGTG
AGGAAAGTGCAAAGTACTGTGTCAAAAACGGATCCTCCTTTTTGACCTTAATGAAACGCGGCCGTCCGATCCTGCTTAAC
TACTATCGTGTGGATGACGGACTCTGGCAGGACCGGGAGCGGTTGCTTCAGCTTTCCTCTTACGCGCTTAATGCCGCGCG
TAAAGAGCGCATACAGCGCTACCAGCGAAATCGGCTTAAGGATCTGCCCAACCTGACTTTTCAGCTGGAAGTCCTGCTCT
GTGAAGCCGGGATTACCAACGAAGATACCCTCCGGTCGCTGGGAGCCAGAACGAGCTGGCTAAAGCTGCGGGCAAAAAAT
AAAGCGCTCAGTATTAAAGTACTGTTTGCCCTGGAAGGGGCTATTGAGGGCCTGCATGAAGCGGCACTCCCGGCGGAGAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCGCTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A427KI93

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567