Detailed information NTG0088263

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABJ77_RS21410
• Genome accession: NZ_AP027632
• Coordinates: 4390165..4391190 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain PSJ-16
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4385165..4396190

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ77_RS21390 (VEE44_40930)	metJ	4386226..4386543 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AABJ77_RS21395 (VEE44_40940)	yiiX	4386727..4387335 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AABJ77_RS21400 (VEE44_40950)	rpmE	4387396..4387608 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AABJ77_RS21405 (VEE44_40960)	priA	4387811..4390009 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
AABJ77_RS21410 (VEE44_40970)	cytR	4390165..4391190 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AABJ77_RS21415 (VEE44_40980)	ftsN	4391282..4392241 (+)	960	WP_000068828.1	cell division protein FtsN	-
AABJ77_RS21420 (VEE44_40990)	hslV	4392334..4392864 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABJ77_RS21425 (VEE44_41000)	hslU	4392874..4394205 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AABJ77_RS21430 (VEE44_41010)	menA	4394272..4395198 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABJ77_RS21435 (VEE44_41020)	rraA	4395291..4395776 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABJ77_RS21440 (VEE44_41030)	zapB	4395861..4396106 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=88263 AABJ77_RS21410 WP_000644904.1 4390165..4391190(+) (cytR) [Escherichia coli strain PSJ-16]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=88263 AABJ77_RS21410 WP_000644904.1 4390165..4391190(+) (cytR) [Escherichia coli strain PSJ-16]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628