Detailed information NTG0882479

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RHP76_RS15850
• Genome accession: NZ_CP134622
• Coordinates: 3449449..3450558 (-)
• Length: 369 a.a.
• NCBI ID: WP_120232417.1
• Uniprot ID: A0A420CK63
• Organism: Chryseobacterium sp. SG20098
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 3444449..3455558

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RHP76_RS15825 (RHP76_15825)	-	3445360..3446331 (+)	972	WP_062673079.1	ion channel	-
RHP76_RS15830 (RHP76_15830)	-	3446332..3446820 (+)	489	WP_062673081.1	YkgJ family cysteine cluster protein	-
RHP76_RS15835 (RHP76_15835)	-	3447058..3447360 (+)	303	WP_062673083.1	hypothetical protein	-
RHP76_RS15840 (RHP76_15840)	-	3447403..3447798 (-)	396	WP_228432354.1	iron chaperone	-
RHP76_RS15845 (RHP76_15845)	gdhA	3447900..3449258 (-)	1359	WP_062673086.1	NADP-specific glutamate dehydrogenase	-
RHP76_RS15850 (RHP76_15850)	dprA	3449449..3450558 (-)	1110	WP_120232417.1	DNA-processing protein DprA	Machinery gene
RHP76_RS15855 (RHP76_15855)	-	3450592..3451359 (-)	768	WP_079240009.1	rhomboid family intramembrane serine protease	-
RHP76_RS15860 (RHP76_15860)	-	3451609..3452535 (+)	927	WP_311228565.1	DUF3078 domain-containing protein	-
RHP76_RS15865 (RHP76_15865)	-	3452764..3453687 (+)	924	WP_311228566.1	DUF3078 domain-containing protein	-
RHP76_RS15870 (RHP76_15870)	sufD	3453761..3455068 (-)	1308	WP_311230265.1	Fe-S cluster assembly protein SufD	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41447.21 Da
• Isoelectric Point: 6.7584

>NTDB_id=882479 RHP76_RS15850 WP_120232417.1 3449449..3450558(-) (dprA) [Chryseobacterium sp. SG20098]
MTSEEYFYAIALRECSQIGDIHFHKLVCTFGSAQEAWNRARKEYKKLEGIGQRTVSDIGNKSHLEFAEEELNFCEKNNIQ
IRLKHLKEIPSLLNECNDTPAILYQKGNIEDAQPKISIVGTRNMTAYGKQFIENFFEATRSSKYTSISGLALGVDKEVHE
QSICHQKPTVAVLAHGFQYLYPAKNRKLSEKILQEGGALITEFSSSRKPDRENFIQRNRIVAGISPATIVVETGFGGGSV
STAAFANDYNRDVFALPGKITDSSSQGCNQLIFHNKATAISTIKDLIELLGLNDPKEKMEELFPYSETKPQLSDNQNLIY
QSIQSYPQICLDDLSMRIDLPTHKILPIILELELLGKVKSFSGRQFIAI

Nucleotide

• Length: 1110 bp

>NTDB_id=882479 RHP76_RS15850 WP_120232417.1 3449449..3450558(-) (dprA) [Chryseobacterium sp. SG20098]
ATGACCTCAGAAGAATACTTTTATGCCATCGCCCTCCGCGAATGCAGCCAGATTGGTGATATCCATTTTCATAAACTTGT
CTGTACTTTCGGAAGCGCTCAGGAAGCCTGGAATAGAGCCAGAAAAGAATATAAAAAGCTGGAAGGAATAGGGCAAAGAA
CAGTTTCAGATATTGGAAATAAGTCTCATTTGGAATTCGCAGAAGAAGAATTAAATTTTTGCGAAAAAAATAATATTCAA
ATCAGGTTAAAACACCTCAAAGAAATCCCGTCTCTACTTAATGAATGTAATGATACTCCCGCTATTCTTTATCAAAAAGG
GAATATTGAGGATGCACAGCCAAAAATAAGTATTGTAGGAACCCGAAATATGACCGCTTATGGAAAACAGTTTATTGAAA
ACTTTTTTGAAGCAACACGATCCTCAAAATATACATCCATAAGCGGTCTCGCTTTAGGCGTCGATAAAGAAGTTCATGAA
CAGTCTATTTGTCATCAAAAGCCCACTGTAGCTGTTCTTGCACATGGTTTTCAATATCTATATCCGGCAAAAAACAGAAA
ACTTTCTGAAAAAATTTTACAGGAAGGAGGAGCATTAATAACGGAGTTCAGCTCTTCCAGAAAACCTGACCGGGAAAATT
TTATCCAGAGAAACAGAATTGTGGCAGGAATATCCCCTGCAACGATTGTAGTGGAAACCGGTTTCGGAGGAGGCTCTGTG
AGCACAGCAGCCTTTGCCAATGATTATAACCGTGATGTTTTTGCACTGCCTGGAAAAATTACAGACAGTTCTAGCCAGGG
ATGTAATCAGCTGATTTTCCATAATAAAGCAACGGCAATTTCTACCATAAAAGATCTTATAGAACTCCTTGGATTAAATG
ATCCTAAAGAAAAAATGGAAGAGTTATTTCCTTATAGCGAGACCAAACCACAATTATCTGACAATCAGAACTTAATATAT
CAATCTATTCAATCTTATCCTCAAATCTGTTTAGACGATCTCTCCATGAGAATTGATCTTCCTACTCATAAAATCTTACC
AATAATTTTAGAATTGGAACTTTTAGGGAAAGTAAAATCATTTTCCGGGAGGCAATTCATCGCAATTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-279)

• DprA winged helix domain (DprA_WH) (308-363)

3D structure

• AlphaFold DB: A0A420CK63

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	50.82	99.187	0.504