Detailed information NTG0088185

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABJ92_RS21735
• Genome accession: NZ_AP027626
• Coordinates: 4484757..4485782 (+)
• Length: 341 a.a.
• NCBI ID: WP_001550015.1
• Uniprot ID: -
• Organism: Escherichia coli strain PSJ-14
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4479757..4490782

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ92_RS21715 (VEE38_41790)	metJ	4480818..4481135 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AABJ92_RS21720 (VEE38_41800)	yiiX	4481319..4481927 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AABJ92_RS21725 (VEE38_41810)	rpmE	4481988..4482200 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AABJ92_RS21730 (VEE38_41820)	priA	4482403..4484601 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
AABJ92_RS21735 (VEE38_41830)	cytR	4484757..4485782 (+)	1026	WP_001550015.1	DNA-binding transcriptional regulator CytR	Regulator
AABJ92_RS21740 (VEE38_41840)	ftsN	4485874..4486833 (+)	960	WP_000068828.1	cell division protein FtsN	-
AABJ92_RS21745 (VEE38_41850)	hslV	4486926..4487456 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABJ92_RS21750 (VEE38_41860)	hslU	4487466..4488797 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AABJ92_RS21755 (VEE38_41870)	menA	4488864..4489790 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABJ92_RS21760 (VEE38_41880)	rraA	4489883..4490368 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABJ92_RS21765 (VEE38_41890)	zapB	4490453..4490698 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37818.84 Da
• Isoelectric Point: 6.8163

>NTDB_id=88185 AABJ92_RS21735 WP_001550015.1 4484757..4485782(+) (cytR) [Escherichia coli strain PSJ-14]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYKQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=88185 AABJ92_RS21735 WP_001550015.1 4484757..4485782(+) (cytR) [Escherichia coli strain PSJ-14]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATAAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628