Detailed information NTG0881835

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: RKQ56_RS10030
• Genome accession: NZ_CP134583
• Coordinates: 2106160..2106861 (-)
• Length: 233 a.a.
• NCBI ID: WP_032030215.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain XH1032
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2101160..2111861

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RKQ56_RS10000 (RKQ56_10005)	-	2101467..2101910 (-)	444	WP_032030219.1	SRPBCC family protein	-
RKQ56_RS10005 (RKQ56_10010)	tadA	2101980..2102483 (-)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
RKQ56_RS10010 (RKQ56_10015)	-	2102490..2103614 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
RKQ56_RS10015 (RKQ56_10020)	ung	2103611..2104324 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
RKQ56_RS10020 (RKQ56_10025)	-	2104375..2104971 (-)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
RKQ56_RS10025 (RKQ56_10030)	gspK	2105201..2106160 (-)	960	WP_032030217.1	type II secretion system minor pseudopilin GspK	-
RKQ56_RS10030 (RKQ56_10035)	xcpW	2106160..2106861 (-)	702	WP_032030215.1	type II secretion system minor pseudopilin GspJ	Machinery gene
RKQ56_RS10035 (RKQ56_10040)	xcpV	2106861..2107241 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
RKQ56_RS10040 (RKQ56_10045)	-	2107231..2107785 (-)	555	WP_000841373.1	type II secretion system protein	-
RKQ56_RS10045 (RKQ56_10050)	-	2107795..2108403 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
RKQ56_RS10050 (RKQ56_10055)	-	2108441..2109214 (-)	774	WP_000497298.1	TatD family hydrolase	-
RKQ56_RS10055 (RKQ56_10060)	-	2109232..2109573 (-)	342	WP_032030213.1	PilZ domain-containing protein	-
RKQ56_RS10060 (RKQ56_10065)	-	2109585..2110565 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
RKQ56_RS10065 (RKQ56_10070)	kdsB	2110577..2111338 (-)	762	WP_000680698.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.50 Da
• Isoelectric Point: 9.3468

>NTDB_id=881835 RKQ56_RS10030 WP_032030215.1 2106160..2106861(-) (xcpW) [Acinetobacter baumannii strain XH1032]
MIKNKYIHIRSSDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=881835 RKQ56_RS10030 WP_032030215.1 2106160..2106861(-) (xcpW) [Acinetobacter baumannii strain XH1032]
ATGATAAAAAATAAATATATTCACATCCGAAGCAGTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAATTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAAGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAAGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991