Detailed information NTG0881052

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: RKQ73_RS08895
• Genome accession: NZ_CP134548
• Coordinates: 1834057..1834758 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594588.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain XH1051
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1829057..1839758

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RKQ73_RS08860 (RKQ73_08865)	kdsB	1829580..1830341 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
RKQ73_RS08865 (RKQ73_08870)	-	1830353..1831333 (+)	981	WP_001075419.1	DNA polymerase III subunit delta'	-
RKQ73_RS08870 (RKQ73_08875)	-	1831345..1831686 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
RKQ73_RS08875 (RKQ73_08880)	-	1831704..1832477 (+)	774	WP_000497301.1	TatD family hydrolase	-
RKQ73_RS08880 (RKQ73_08885)	-	1832515..1833123 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
RKQ73_RS08885 (RKQ73_08890)	-	1833133..1833687 (+)	555	WP_000841372.1	type II secretion system protein	-
RKQ73_RS08890 (RKQ73_08895)	xcpV	1833677..1834057 (+)	381	WP_000836909.1	type II secretion system minor pseudopilin GspI	Machinery gene
RKQ73_RS08895 (RKQ73_08900)	xcpW	1834057..1834758 (+)	702	WP_000594588.1	type II secretion system minor pseudopilin GspJ	Machinery gene
RKQ73_RS08900 (RKQ73_08905)	gspK	1834758..1835717 (+)	960	WP_001218621.1	type II secretion system minor pseudopilin GspK	-
RKQ73_RS08905 (RKQ73_08910)	-	1835947..1836543 (+)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
RKQ73_RS08910 (RKQ73_08915)	ung	1836594..1837307 (+)	714	WP_001177527.1	uracil-DNA glycosylase	-
RKQ73_RS08915 (RKQ73_08920)	-	1837304..1838428 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
RKQ73_RS08920 (RKQ73_08925)	tadA	1838435..1838938 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
RKQ73_RS08925 (RKQ73_08930)	-	1839008..1839451 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26625.55 Da
• Isoelectric Point: 9.3468

>NTDB_id=881052 RKQ73_RS08895 WP_000594588.1 1834057..1834758(+) (xcpW) [Acinetobacter baumannii strain XH1051]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQDGNS

Nucleotide

• Length: 702 bp

>NTDB_id=881052 RKQ73_RS08895 WP_000594588.1 1834057..1834758(+) (xcpW) [Acinetobacter baumannii strain XH1051]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATACCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGACGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991