Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   WMY90_RS00620 Genome accession   NZ_CP150875
Coordinates   120769..121575 (+) Length   268 a.a.
NCBI ID   WP_022096934.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain TCI125     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 115769..126575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WMY90_RS00600 (WMY90_00600) tuf 116818..118014 (+) 1197 WP_002949971.1 elongation factor Tu -
  WMY90_RS00605 (WMY90_00605) tpiA 118263..119021 (+) 759 WP_002946314.1 triose-phosphate isomerase -
  WMY90_RS00610 (WMY90_00610) tmk 119259..119888 (+) 630 WP_002946312.1 dTMP kinase -
  WMY90_RS00615 (WMY90_00615) - 119897..120772 (+) 876 WP_002946311.1 DNA polymerase III subunit delta' -
  WMY90_RS00620 (WMY90_00620) yaaT 120769..121575 (+) 807 WP_022096934.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  WMY90_RS00625 (WMY90_00625) yabA 121562..121882 (+) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  WMY90_RS00630 (WMY90_00630) rsmI 121885..122751 (+) 867 WP_022096935.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  WMY90_RS00635 (WMY90_00635) - 122888..124123 (+) 1236 WP_022096936.1 ammonium transporter -
  WMY90_RS00640 (WMY90_00640) - 124134..124475 (+) 342 WP_022096937.1 P-II family nitrogen regulator -
  WMY90_RS00645 (WMY90_00645) - 124573..125229 (+) 657 WP_011225604.1 glycoside hydrolase family 73 protein -
  WMY90_RS00650 (WMY90_00650) - 125252..126073 (+) 822 WP_022096938.1 Cof-type HAD-IIB family hydrolase -
  WMY90_RS00655 (WMY90_00655) - 126092..126563 (-) 472 Protein_120 YgjV family protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29827.27 Da        Isoelectric Point: 4.6494

>NTDB_id=880827 WMY90_RS00620 WP_022096934.1 120769..121575(+) (yaaT) [Streptococcus thermophilus strain TCI125]
MTEVIGIKFEENGAVEYVVPDKNYTKGDFVVVLEKKDKRLAQVVMENTVFPEVSLPVDLNRVEGLASERDFARYDENLLK
AEQSMGVVADLIAQNQLDMKVVDIVFPLNSSYVLISFVAEKRVDFRQLLEDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKARYPDLGEEIETKEGRGQVIAIDVI
AGTVKVMFEKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=880827 WMY90_RS00620 WP_022096934.1 120769..121575(+) (yaaT) [Streptococcus thermophilus strain TCI125]
ATGACAGAAGTCATTGGCATCAAATTTGAAGAAAATGGAGCGGTAGAATACGTTGTTCCTGATAAAAATTACACCAAAGG
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGTTTAGCCCAGGTTGTTATGGAAAATACTGTTTTTCCAGAGGTTA
GTTTACCTGTGGATTTGAATCGGGTCGAAGGCTTGGCTAGTGAGAGAGATTTCGCTAGATATGATGAAAATCTTTTAAAG
GCTGAACAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAAGTGGTGGACATAGTCTTTCC
TCTAAATAGCTCTTATGTGCTTATCAGTTTCGTGGCTGAAAAGCGGGTAGATTTTCGTCAATTGCTCGAGGATTTGGCGG
CTTATTTTAAGACGCGAATTGAGTTACGTCAAATTTCCAGTCGTGAGGAATCAAAAATTTATGGTGGTTTAGGTCCTTGT
GGACGTGCACTGTGTTGTTCTAGTTTTTTGGGCGAATTCCCACCGGTATCGATTAAGATGGCTAAAAATCAAAGTTTGTC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGACGTCTCATGTGTTGTCTCAGTTATGAAGATGATTTTTACCGAGACA
GTAAGGCTCGTTATCCTGACTTGGGTGAAGAGATTGAGACCAAGGAAGGTAGAGGTCAAGTCATTGCTATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGAAAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.205

98.134

0.414