Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | RKV27_RS06280 | Genome accession | NZ_CP134533 |
| Coordinates | 1203942..1204241 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844410.1 | Uniprot ID | A0A7R6NZL1 |
| Organism | Staphylococcus aureus strain KNIH_5844 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1198942..1209241
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RKV27_RS06240 | - | 1199003..1199206 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| RKV27_RS06245 | - | 1199203..1200189 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| RKV27_RS06250 | - | 1200189..1200518 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| RKV27_RS06255 | - | 1200515..1201138 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| RKV27_RS06260 | comGA | 1201190..1202164 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RKV27_RS06265 | comGB | 1202136..1203206 (+) | 1071 | WP_000776401.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| RKV27_RS06270 | comGC | 1203220..1203531 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RKV27_RS06275 | comGD | 1203509..1203955 (+) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| RKV27_RS06280 | comGE | 1203942..1204241 (+) | 300 | WP_000844410.1 | hypothetical protein | Machinery gene |
| RKV27_RS06285 | comGF | 1204159..1204656 (+) | 498 | WP_020978197.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RKV27_RS06290 | - | 1204753..1204899 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| RKV27_RS06295 | - | 1204889..1205413 (+) | 525 | WP_001015121.1 | shikimate kinase | - |
| RKV27_RS06300 | gcvT | 1205572..1206663 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| RKV27_RS06305 | gcvPA | 1206683..1208029 (+) | 1347 | WP_000019681.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11079.18 Da Isoelectric Point: 9.9215
>NTDB_id=880745 RKV27_RS06280 WP_000844410.1 1203942..1204241(+) (comGE) [Staphylococcus aureus strain KNIH_5844]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=880745 RKV27_RS06280 WP_000844410.1 1203942..1204241(+) (comGE) [Staphylococcus aureus strain KNIH_5844]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus N315 |
100 |
100 |
1 |
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |