Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   RKV27_RS00440 Genome accession   NZ_CP134533
Coordinates   100498..101385 (+) Length   295 a.a.
NCBI ID   WP_000143420.1    Uniprot ID   A0A2S6DP21
Organism   Staphylococcus aureus strain KNIH_5844     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 95498..106385
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RKV27_RS00410 - 96230..96991 (+) 762 WP_000323447.1 alpha/beta hydrolase family protein -
  RKV27_RS00415 - 97236..97691 (+) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  RKV27_RS00420 - 97813..97914 (+) 102 WP_000731972.1 SE2200 family small protein -
  RKV27_RS00425 - 97974..99398 (-) 1425 WP_000953762.1 alkaline phosphatase -
  RKV27_RS00430 - 99596..99796 (+) 201 WP_000604727.1 hypothetical protein -
  RKV27_RS00435 braR 99822..100487 (+) 666 WP_000697879.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  RKV27_RS00440 braS 100498..101385 (+) 888 WP_000143420.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  RKV27_RS00445 - 101494..102249 (+) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  RKV27_RS00450 - 102246..104246 (+) 2001 WP_000776739.1 ABC transporter permease -
  RKV27_RS00455 - 104905..105018 (+) 114 Protein_90 hypothetical protein -
  RKV27_RS00460 - 105400..105660 (+) 261 WP_001789910.1 hypothetical protein -
  RKV27_RS00465 - 105670..106167 (+) 498 WP_001065269.1 glutathione peroxidase -
  RKV27_RS00470 - 106275..106367 (-) 93 WP_010956583.1 hypothetical protein -

Sequence

Protein


Download         Length: 295 a.a.        Molecular weight: 34045.32 Da        Isoelectric Point: 5.8962

>NTDB_id=880723 RKV27_RS00440 WP_000143420.1 100498..101385(+) (braS) [Staphylococcus aureus strain KNIH_5844]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=880723 RKV27_RS00440 WP_000143420.1 100498..101385(+) (braS) [Staphylococcus aureus strain KNIH_5844]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGCCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACACACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(191-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2S6DP21

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.322

100

0.993