Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   OCX20_RS10745 Genome accession   NZ_AP024738
Coordinates   2146103..2146819 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain 59731     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2141103..2151819
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OCX20_RS10715 - 2141319..2141945 (+) 627 WP_000522384.1 nitroreductase family protein -
  OCX20_RS10720 - 2142306..2143091 (+) 786 WP_000867941.1 carbon-nitrogen family hydrolase -
  OCX20_RS14700 hld 2143690..2143770 (-) 81 WP_000046023.1 delta-hemolysin -
  OCX20_RS10730 - 2144060..2144623 (+) 564 WP_001105705.1 accessory gene regulator AgrB -
  OCX20_RS10735 agrD 2144627..2144767 (+) 141 WP_000735197.1 cyclic lactone autoinducer peptide AgrD -
  OCX20_RS10740 agrC 2144792..2146084 (+) 1293 WP_172576662.1 quorum-sensing sensor histidine kinase AgrC -
  OCX20_RS10745 agrA 2146103..2146819 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  OCX20_RS10750 - 2146891..2147000 (+) 110 Protein_2085 hypothetical protein -
  OCX20_RS10755 - 2147188..2148147 (-) 960 WP_117201054.1 carbohydrate kinase family protein -
  OCX20_RS10760 - 2148144..2149628 (-) 1485 WP_000141427.1 sucrose-6-phosphate hydrolase -
  OCX20_RS10765 - 2149777..2150727 (-) 951 WP_000790329.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=88053 OCX20_RS10745 WP_000688492.1 2146103..2146819(+) (agrA) [Staphylococcus aureus strain 59731]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=88053 OCX20_RS10745 WP_000688492.1 2146103..2146819(+) (agrA) [Staphylococcus aureus strain 59731]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment