Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   RH061_RS06450 Genome accession   NZ_CP134494
Coordinates   1306553..1307512 (+) Length   319 a.a.
NCBI ID   WP_311074755.1    Uniprot ID   -
Organism   Mesobacillus jeotgali strain PS1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1301553..1312512
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RH061_RS06435 (RH061_06435) - 1304349..1304537 (-) 189 WP_311074750.1 YjzD family protein -
  RH061_RS06440 (RH061_06440) - 1304797..1305534 (+) 738 WP_311074752.1 hydrolase -
  RH061_RS06445 (RH061_06445) - 1305601..1306419 (+) 819 WP_311074754.1 hypothetical protein -
  RH061_RS06450 (RH061_06450) med 1306553..1307512 (+) 960 WP_311074755.1 BMP family ABC transporter substrate-binding protein Regulator
  RH061_RS06455 (RH061_06455) comZ 1307537..1307725 (+) 189 WP_041967344.1 ComZ family protein Regulator
  RH061_RS06460 (RH061_06460) - 1307754..1308065 (-) 312 WP_311074756.1 hypothetical protein -
  RH061_RS06465 (RH061_06465) - 1308380..1309312 (+) 933 WP_311074758.1 beta-ketoacyl-ACP synthase III -
  RH061_RS06470 (RH061_06470) fabF 1309372..1310613 (+) 1242 WP_311076303.1 beta-ketoacyl-ACP synthase II -
  RH061_RS06475 (RH061_06475) - 1311061..1312044 (+) 984 WP_311074759.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 319 a.a.        Molecular weight: 35560.92 Da        Isoelectric Point: 4.4246

>NTDB_id=880422 RH061_RS06450 WP_311074755.1 1306553..1307512(+) (med) [Mesobacillus jeotgali strain PS1]
MHRMLKRFGLILLSLLLLGGCGQPLSTGKVEKVGLLVPETINDQVWGTKGYRGLLQIQSSLGVDVFFKEGMNSQEVVEDA
VREFDRQGVNLIYGHGNEYAAYFNKISSEYPDIHFISFNGDAREGNTTSLNFKAYAMGFFGGMVASYMSETGRVGIIAAY
EWQPEVEGFYDGAMFENKDMKVDIRLVGHWDDEKKALDVLDDVLAEGADVIYPAGDGYNVPVIERVKDRGLYVIGYISDQ
SDFGESTVLTSTVQHVDDLYELTAEKYNNGELKSGNLSFDFQDGVISLGKFSPQVDSNFRERIGTYINTYKETGKLPNQ

Nucleotide


Download         Length: 960 bp        

>NTDB_id=880422 RH061_RS06450 WP_311074755.1 1306553..1307512(+) (med) [Mesobacillus jeotgali strain PS1]
ATGCATCGGATGCTGAAACGTTTCGGGCTAATATTGTTAAGCCTTCTTTTGCTTGGGGGATGCGGACAACCTCTTTCTAC
GGGCAAGGTTGAGAAAGTAGGCCTCTTGGTGCCTGAAACTATTAATGATCAGGTGTGGGGGACGAAAGGGTATCGGGGAC
TCCTGCAAATCCAATCCAGCCTGGGAGTTGATGTCTTCTTCAAAGAAGGGATGAATTCACAGGAAGTTGTTGAGGATGCG
GTGAGGGAGTTCGACCGGCAGGGAGTCAATCTTATATATGGACATGGAAATGAGTACGCTGCTTATTTCAATAAAATTTC
AAGTGAATATCCCGACATACATTTCATTAGTTTTAATGGAGATGCGAGGGAAGGAAATACGACAAGCTTAAACTTCAAGG
CATATGCTATGGGCTTTTTTGGCGGTATGGTCGCGAGCTATATGTCTGAAACCGGCAGAGTCGGAATCATAGCCGCGTAT
GAGTGGCAGCCTGAAGTGGAGGGCTTTTACGATGGCGCGATGTTTGAAAATAAGGATATGAAGGTCGACATTCGCCTTGT
TGGACACTGGGATGACGAAAAGAAGGCACTCGATGTCTTGGACGATGTATTGGCTGAGGGAGCTGATGTCATATACCCTG
CTGGAGATGGGTATAATGTACCTGTCATTGAAAGGGTAAAGGACCGAGGTTTATATGTGATTGGCTATATTTCCGACCAA
TCAGATTTCGGTGAGTCCACGGTATTGACCAGTACTGTCCAGCATGTGGATGACTTGTATGAACTGACGGCAGAGAAGTA
CAATAATGGGGAGCTCAAATCGGGCAACCTGAGCTTCGACTTCCAGGATGGAGTTATTTCCCTTGGGAAATTCAGTCCTC
AAGTCGATTCAAATTTCAGGGAAAGAATCGGGACTTATATCAATACATATAAGGAAACCGGCAAATTGCCCAACCAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(31-318)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

53.822

98.433

0.53