Detailed information
Bioinformatically predicted
Overview
| Name | comX/sigX | Type | Regulator |
| Locus tag | RJW53_RS00410 | Genome accession | NZ_CP134488 |
| Coordinates | 71597..71863 (+) | Length | 88 a.a. |
| NCBI ID | WP_014635810.1 | Uniprot ID | A0A2K1SXG9 |
| Organism | Streptococcus suis strain NLS50 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 66597..76863
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RJW53_RS00380 (RJW53_00380) | recA | 67828..68976 (+) | 1149 | WP_023369045.1 | recombinase RecA | Machinery gene |
| RJW53_RS00385 (RJW53_00385) | spx | 69212..69610 (+) | 399 | WP_002939362.1 | transcriptional regulator Spx | - |
| RJW53_RS00390 (RJW53_00390) | - | 69710..69976 (+) | 267 | WP_002939360.1 | IreB family regulatory phosphoprotein | - |
| RJW53_RS00395 (RJW53_00395) | ruvX | 69976..70395 (+) | 420 | WP_002939356.1 | Holliday junction resolvase RuvX | - |
| RJW53_RS00400 (RJW53_00400) | - | 70407..70739 (+) | 333 | WP_023369048.1 | DUF1292 domain-containing protein | - |
| RJW53_RS00405 (RJW53_00405) | - | 70946..71524 (+) | 579 | WP_012774895.1 | nucleotidyltransferase family protein | - |
| RJW53_RS00410 (RJW53_00410) | comX/sigX | 71597..71863 (+) | 267 | WP_014635810.1 | hypothetical protein | Regulator |
| RJW53_RS00415 (RJW53_00415) | rpsJ | 72186..72494 (+) | 309 | WP_014735259.1 | 30S ribosomal protein S10 | - |
| RJW53_RS00420 (RJW53_00420) | rplC | 72631..73257 (+) | 627 | WP_011921686.1 | 50S ribosomal protein L3 | - |
| RJW53_RS00425 (RJW53_00425) | rplD | 73282..73905 (+) | 624 | WP_004195490.1 | 50S ribosomal protein L4 | - |
| RJW53_RS00430 (RJW53_00430) | - | 73905..74204 (+) | 300 | WP_004195491.1 | 50S ribosomal protein L23 | - |
| RJW53_RS00435 (RJW53_00435) | rplB | 74222..75055 (+) | 834 | WP_002936663.1 | 50S ribosomal protein L2 | - |
| RJW53_RS00440 (RJW53_00440) | rpsS | 75306..75587 (+) | 282 | WP_000533766.1 | 30S ribosomal protein S19 | - |
| RJW53_RS00445 (RJW53_00445) | rplV | 75605..75949 (+) | 345 | WP_002936662.1 | 50S ribosomal protein L22 | - |
| RJW53_RS00450 (RJW53_00450) | rpsC | 75962..76615 (+) | 654 | WP_074389015.1 | 30S ribosomal protein S3 | - |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 10670.50 Da Isoelectric Point: 9.1949
>NTDB_id=880297 RJW53_RS00410 WP_014635810.1 71597..71863(+) (comX/sigX) [Streptococcus suis strain NLS50]
MEFETVCLKVRNLGRLYCYFKVKFRTHIEAIIRKQESQKCKFDRLLHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
MEFETVCLKVRNLGRLYCYFKVKFRTHIEAIIRKQESQKCKFDRLLHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
Nucleotide
Download Length: 267 bp
>NTDB_id=880297 RJW53_RS00410 WP_014635810.1 71597..71863(+) (comX/sigX) [Streptococcus suis strain NLS50]
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAACCCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCCTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAACCCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCCTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX/sigX | Streptococcus suis D9 |
72.603 |
82.955 |
0.602 |
| comX/sigX | Streptococcus suis isolate S10 |
71.233 |
82.955 |
0.591 |
| comX/sigX | Streptococcus suis P1/7 |
71.233 |
82.955 |
0.591 |