Detailed information NTG0880156

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: RJW55_RS02895
• Genome accession: NZ_CP134473
• Coordinates: 597162..598211 (+)
• Length: 349 a.a.
• NCBI ID: WP_043026533.1
• Uniprot ID: -
• Organism: Streptococcus suis strain TMW_SS028
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 592162..603211

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJW55_RS02860 (RJW55_02860)	-	592676..593770 (+)	1095	WP_043033348.1	sensor histidine kinase	-
RJW55_RS02865 (RJW55_02865)	-	593767..594369 (+)	603	WP_043033350.1	response regulator transcription factor	-
RJW55_RS02870 (RJW55_02870)	-	594474..594692 (+)	219	WP_043026539.1	YqgQ family protein	-
RJW55_RS02875 (RJW55_02875)	-	594692..595078 (+)	387	WP_004194735.1	rhodanese-like domain-containing protein	-
RJW55_RS02880 (RJW55_02880)	-	595135..595857 (+)	723	WP_043026537.1	serine protease	-
RJW55_RS02885 (RJW55_02885)	rsmD	596158..596697 (+)	540	WP_043026535.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
RJW55_RS02890 (RJW55_02890)	coaD	596687..597175 (+)	489	WP_002939048.1	pantetheine-phosphate adenylyltransferase	-
RJW55_RS02895 (RJW55_02895)	sepM	597162..598211 (+)	1050	WP_043026533.1	SepM family pheromone-processing serine protease	Regulator
RJW55_RS02900 (RJW55_02900)	-	598399..599040 (+)	642	WP_043026531.1	YutD-like domain-containing protein	-
RJW55_RS02905 (RJW55_02905)	rlmN	599049..600161 (+)	1113	WP_012028433.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	-
RJW55_RS02910 (RJW55_02910)	-	600158..600679 (+)	522	WP_043026528.1	VanZ family protein	-
RJW55_RS02915 (RJW55_02915)	trpB	601306..602481 (+)	1176	WP_043026526.1	tryptophan synthase subunit beta	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37732.74 Da
• Isoelectric Point: 4.4632

>NTDB_id=880156 RJW55_RS02895 WP_043026533.1 597162..598211(+) (sepM) [Streptococcus suis strain TMW_SS028]
MKKNRKLTLIASIVLGTLLIWFAVFVRLPYYLESPGGAADIRQVLTVNNQIDQEDGSYNFTYVSVQQATALQLFAAQFDP
YTTIRSSEEMTGGADNEEYFRIAQFYMETSQNMAKYQGLTLAGKEVNLDFFGVYVLALADDSTFKKVLNIADTVVSINGK
TFESSPDLIKYVSGLELGSDVTVGYISAGQEKSADGKIIKLSNGKNGIGITLVDHTEVQSSIPIDFQTGDIGGPSAGLMF
TLAIYTQLAEPDLRDGRIIAGTGTIEQDGKVGDIGGADKKVISAAKSGASIFFVPNNPVDVEVLKENPKAKTNYEEAKEA
AEKAGLDIEVVPVKTVQEAIDYLKKTKGE

Nucleotide

• Length: 1050 bp

>NTDB_id=880156 RJW55_RS02895 WP_043026533.1 597162..598211(+) (sepM) [Streptococcus suis strain TMW_SS028]
ATGAAGAAAAATAGGAAGTTAACCTTAATTGCATCTATTGTTTTAGGAACTCTTTTGATTTGGTTTGCCGTTTTTGTTCG
TCTGCCTTATTATTTGGAAAGTCCAGGTGGAGCTGCCGATATTCGTCAGGTACTAACGGTGAACAATCAAATAGACCAAG
AGGATGGCTCTTACAACTTCACCTATGTATCAGTCCAACAAGCTACAGCTTTACAACTATTCGCTGCTCAGTTTGATCCC
TATACGACAATTCGTTCCTCTGAAGAGATGACAGGAGGGGCCGACAATGAAGAGTATTTCCGTATAGCACAGTTTTACAT
GGAGACATCGCAAAATATGGCGAAGTACCAAGGTTTGACCTTGGCAGGAAAAGAAGTCAATCTTGATTTCTTTGGTGTCT
ATGTACTTGCCTTGGCGGATGATTCGACCTTTAAAAAAGTTCTTAATATTGCTGACACTGTTGTGAGTATCAATGGAAAA
ACATTTGAGTCTTCTCCTGATTTGATTAAATATGTGAGTGGCTTGGAACTTGGAAGTGATGTGACAGTTGGTTATATTAG
CGCTGGTCAGGAAAAATCTGCGGACGGTAAGATTATCAAATTGTCTAATGGCAAAAACGGGATAGGTATCACTCTCGTAG
ATCATACAGAGGTTCAAAGTTCGATTCCGATTGATTTCCAAACAGGAGATATTGGTGGTCCAAGTGCTGGTCTGATGTTT
ACACTTGCCATCTATACTCAACTCGCAGAGCCTGACTTACGTGATGGTCGAATTATTGCTGGTACGGGGACTATCGAGCA
GGATGGAAAAGTAGGTGACATTGGTGGGGCTGATAAGAAGGTTATTTCGGCAGCTAAGTCAGGTGCAAGTATCTTTTTCG
TACCAAATAATCCAGTTGATGTGGAAGTTTTGAAGGAAAATCCAAAGGCTAAAACCAACTATGAGGAAGCTAAAGAAGCT
GCGGAGAAAGCAGGATTGGATATTGAGGTAGTTCCTGTGAAAACTGTTCAAGAGGCTATTGATTATTTGAAGAAAACGAA
GGGCGAGTAA

Domains

Predicted by InterproScan.

• PDZ domain (PDZ_2) (132-195)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (232-314)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	61.383	99.427	0.61