Detailed information NTG0879933

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RJ565_RS02415
• Genome accession: NZ_CP134396
• Coordinates: 504832..505632 (+)
• Length: 266 a.a.
• NCBI ID: WP_180662752.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain ICDC15003-8-1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 499832..510632

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJ565_RS02380 (RJ565_02380)	pseH	500323..500865 (+)	543	WP_310957895.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
RJ565_RS02385 (RJ565_02385)	-	500798..501736 (-)	939	WP_310957896.1	tetraacyldisaccharide 4'-kinase	-
RJ565_RS02390 (RJ565_02390)	-	501733..502515 (-)	783	WP_310957897.1	NAD+ synthase	-
RJ565_RS02400 (RJ565_02400)	ilvC	502773..503765 (+)	993	WP_310957898.1	ketol-acid reductoisomerase	-
RJ565_RS02405 (RJ565_02405)	minD	503789..504595 (+)	807	WP_001019049.1	septum site-determining protein MinD	-
RJ565_RS02410 (RJ565_02410)	minE	504592..504825 (+)	234	WP_000051425.1	cell division topological specificity factor MinE	-
RJ565_RS02415 (RJ565_02415)	dprA	504832..505632 (+)	801	WP_180662752.1	DNA-processing protein DprA	Machinery gene
RJ565_RS02420 (RJ565_02420)	dprB	505629..506033 (+)	405	WP_180662754.1	Holliday junction resolvase RuvX	Machinery gene
RJ565_RS02425 (RJ565_02425)	-	506164..506732 (+)	569	Protein_473	tetratricopeptide repeat protein	-
RJ565_RS02430 (RJ565_02430)	-	506918..507256 (+)	339	WP_180662755.1	hypothetical protein	-
RJ565_RS02435 (RJ565_02435)	-	507240..507800 (+)	561	WP_180662757.1	hypothetical protein	-
RJ565_RS02440 (RJ565_02440)	-	507902..508783 (-)	882	WP_180662759.1	pseudouridine synthase	-
RJ565_RS02445 (RJ565_02445)	recJ	508783..510333 (-)	1551	WP_180662761.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29857.65 Da
• Isoelectric Point: 7.2880

>NTDB_id=879933 RJ565_RS02415 WP_180662752.1 504832..505632(+) (dprA) [Helicobacter pylori strain ICDC15003-8-1]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLQSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMEDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIRRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=879933 RJ565_RS02415 WP_180662752.1 504832..505632(+) (dprA) [Helicobacter pylori strain ICDC15003-8-1]
ATGAAAAGTAATTTCCAATACAGCGCACTAGAAAATATCCCTAAAGCTTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACAAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACGATCACTCTAGCTAGAGAGCTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTCATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTACAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCTCAAAAATACCAAAAGCCATTATTTGTTTTACCCCAGCGCTTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGGAAGATGAATTTTTAGAATATTGTGCGAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAGGCGCATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41