Detailed information NTG0879659

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: RJD40_RS20275
• Genome accession: NZ_CP134281
• Coordinates: 1060349..1061446 (-)
• Length: 365 a.a.
• NCBI ID: WP_418114519.1
• Uniprot ID: -
• Organism: Vibrio scophthalmi strain 21FBVib0106
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1055349..1066446

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJD40_RS20260 (RJD40_20260)	glpD	1055461..1057017 (+)	1557	WP_418114516.1	glycerol-3-phosphate dehydrogenase	-
RJD40_RS20265 (RJD40_20265)	-	1057084..1057743 (+)	660	WP_418114517.1	PilZ domain-containing protein	-
RJD40_RS20270 (RJD40_20270)	luxQ	1057782..1060349 (-)	2568	WP_418114518.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
RJD40_RS20275 (RJD40_20275)	luxP	1060349..1061446 (-)	1098	WP_418114519.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
RJD40_RS20280 (RJD40_20280)	-	1061562..1061885 (-)	324	WP_418114520.1	GIY-YIG nuclease family protein	-
RJD40_RS20285 (RJD40_20285)	-	1061878..1062534 (-)	657	WP_065546285.1	YceH family protein	-
RJD40_RS20290 (RJD40_20290)	-	1062568..1062762 (-)	195	WP_005599403.1	hypothetical protein	-
RJD40_RS20295 (RJD40_20295)	-	1062953..1063273 (+)	321	WP_418114521.1	DUF496 family protein	-
RJD40_RS20300 (RJD40_20300)	-	1063674..1063922 (+)	249	WP_418114522.1	YgjV family protein	-
RJD40_RS20305 (RJD40_20305)	glpK	1064048..1065553 (-)	1506	WP_418114523.1	glycerol kinase GlpK	-
RJD40_RS20310 (RJD40_20310)	-	1065664..1066257 (-)	594	WP_005599407.1	OmpA family protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41148.08 Da
• Isoelectric Point: 5.2647

>NTDB_id=879659 RJD40_RS20275 WP_418114519.1 1060349..1061446(-) (luxP) [Vibrio scophthalmi strain 21FBVib0106]
MYKTALATLLSVFSSVALAHSTQVLNGYWEYDEYLSSHPSQKALTGKLAQAVREHPAAINEVQDRSISISVVYPGQQISD
YWIRNIKAFEARLDKLGIKYEINQVFTRPNVDVRQQSLSLLEAIQNNSDYLIFTLDTTRHRKFIEHVISSTDTKLILQNI
TTPVRAWDDHQPFMYVGFDHQLGTQHIENYYKEKAATGSKYSVLYFSEGYISDARGDTFIEEMSHHDGYKLSSSFYTKAT
RESGFNAAMNAVEKDPDISFIYACSTDVALGAVDALKQLKRGDILVNGWGGGTAELEAIEQGDIDVTVMRMNDDTGIAMA
EAIKWDLEGKQVPHVYSGDFEVVTSADSGEKIERLKRRAFRYSDQ

Nucleotide

• Length: 1098 bp

>NTDB_id=879659 RJD40_RS20275 WP_418114519.1 1060349..1061446(-) (luxP) [Vibrio scophthalmi strain 21FBVib0106]
ATGTATAAAACGGCTCTAGCTACGCTACTGTCTGTCTTCTCGTCTGTCGCGTTAGCGCATTCAACTCAAGTGTTAAACGG
CTATTGGGAATACGATGAATATTTGTCGTCTCATCCAAGTCAAAAGGCCTTAACGGGTAAGCTCGCGCAAGCGGTGAGAG
AGCATCCTGCAGCTATCAATGAAGTGCAAGATAGATCAATCTCAATCTCGGTGGTCTATCCAGGACAGCAAATCTCAGAC
TACTGGATTCGAAATATCAAAGCGTTTGAAGCTCGCTTAGATAAGTTAGGTATTAAGTATGAGATTAATCAGGTGTTTAC
TCGACCGAATGTCGATGTACGACAGCAAAGCTTGTCACTGCTTGAAGCAATTCAGAATAATTCTGATTACCTCATTTTTA
CACTAGATACCACTCGCCATCGAAAATTCATCGAACACGTGATTAGCTCGACCGACACTAAACTCATTTTGCAGAATATT
ACCACGCCAGTGCGCGCTTGGGATGATCATCAGCCATTTATGTATGTTGGTTTTGACCACCAGCTTGGCACACAGCACAT
CGAAAACTACTACAAAGAAAAAGCCGCAACCGGCAGTAAGTATTCCGTGTTGTACTTTTCAGAAGGCTACATTAGTGATG
CGCGTGGAGATACCTTCATTGAAGAGATGAGCCATCATGACGGCTATAAGTTAAGTTCTTCATTCTACACCAAAGCGACC
AGAGAATCGGGTTTCAACGCAGCCATGAATGCGGTGGAGAAGGATCCGGATATTTCATTTATTTATGCTTGTTCAACCGA
TGTTGCACTGGGTGCCGTCGATGCGCTAAAACAGCTTAAACGTGGCGATATTTTGGTTAACGGCTGGGGGGGAGGCACTG
CTGAGTTAGAGGCGATTGAACAAGGTGATATTGATGTGACGGTGATGCGTATGAACGATGACACCGGCATAGCGATGGCT
GAGGCCATTAAGTGGGACTTAGAAGGTAAGCAAGTTCCACATGTTTATTCGGGCGACTTTGAAGTGGTAACGAGTGCCGA
CAGCGGTGAAAAAATCGAACGCTTAAAGCGTCGTGCATTTAGGTACTCAGACCAATAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-324)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	64.365	99.178	0.638