Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   OCX19_RS10850 Genome accession   NZ_AP024734
Coordinates   2155930..2156646 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain 59691     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2150930..2161646
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OCX19_RS10820 - 2151146..2151772 (+) 627 WP_261921433.1 nitroreductase family protein -
  OCX19_RS10825 - 2152133..2152918 (+) 786 WP_000867941.1 carbon-nitrogen family hydrolase -
  OCX19_RS14515 hld 2153517..2153597 (-) 81 WP_000046023.1 delta-hemolysin -
  OCX19_RS10835 - 2153887..2154450 (+) 564 WP_001105705.1 accessory gene regulator AgrB -
  OCX19_RS10840 agrD 2154454..2154594 (+) 141 WP_000735197.1 cyclic lactone autoinducer peptide AgrD -
  OCX19_RS10845 agrC 2154619..2155911 (+) 1293 WP_172576662.1 quorum-sensing sensor histidine kinase AgrC -
  OCX19_RS10850 agrA 2155930..2156646 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  OCX19_RS10855 - 2156718..2156827 (+) 110 Protein_2106 hypothetical protein -
  OCX19_RS10860 - 2157015..2157974 (-) 960 WP_117201054.1 carbohydrate kinase -
  OCX19_RS10865 - 2157971..2159455 (-) 1485 WP_000141427.1 sucrose-6-phosphate hydrolase -
  OCX19_RS10870 - 2159604..2160554 (-) 951 WP_000790329.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=87965 OCX19_RS10850 WP_000688492.1 2155930..2156646(+) (agrA) [Staphylococcus aureus strain 59691]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=87965 OCX19_RS10850 WP_000688492.1 2155930..2156646(+) (agrA) [Staphylococcus aureus strain 59691]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment