Detailed information NTG0879581

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: RJD38_RS19790
• Genome accession: NZ_CP134272
• Coordinates: 1074471..1075568 (-)
• Length: 365 a.a.
• NCBI ID: WP_005599399.1
• Uniprot ID: A0A1C7FG75
• Organism: Vibrio scophthalmi strain 20FBVib0200
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1069471..1080568

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJD38_RS19775 (RJD38_19760)	glpD	1069583..1071139 (+)	1557	WP_065546282.1	glycerol-3-phosphate dehydrogenase	-
RJD38_RS19780 (RJD38_19765)	-	1071206..1071865 (+)	660	WP_367971474.1	PilZ domain-containing protein	-
RJD38_RS19785 (RJD38_19770)	luxQ	1071904..1074471 (-)	2568	WP_065546284.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
RJD38_RS19790 (RJD38_19775)	luxP	1074471..1075568 (-)	1098	WP_005599399.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
RJD38_RS19795 (RJD38_19780)	-	1075684..1076007 (-)	324	WP_005599401.1	GIY-YIG nuclease family protein	-
RJD38_RS19800 (RJD38_19785)	-	1076000..1076656 (-)	657	WP_065546285.1	YceH family protein	-
RJD38_RS19805 (RJD38_19790)	-	1076690..1076884 (-)	195	WP_005599403.1	hypothetical protein	-
RJD38_RS19810 (RJD38_19795)	-	1077075..1077395 (+)	321	WP_005599404.1	DUF496 family protein	-
RJD38_RS19815 (RJD38_19800)	-	1077801..1078037 (+)	237	WP_005599405.1	YgjV family protein	-
RJD38_RS19820 (RJD38_19805)	glpK	1078163..1079668 (-)	1506	WP_065546286.1	glycerol kinase GlpK	-
RJD38_RS19825 (RJD38_19810)	-	1079779..1080264 (-)	486	Protein_980	OmpA family protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41158.12 Da
• Isoelectric Point: 5.2647

>NTDB_id=879581 RJD38_RS19790 WP_005599399.1 1074471..1075568(-) (luxP) [Vibrio scophthalmi strain 20FBVib0200]
MYKTALATLLSVFSSVALAHSTQVLNGYWEYDEYLSSHPSQKALTGKLAQAVREHPAAINEVQDRPISISVVYPGQQISD
YWIRNIKAFEARLDKLGIKYEINQVFTRPNVDVRQQSLSLLEAIQNNSDYLIFTLDTTRHRKFIEHVISSTDTKLILQNI
TTPVRAWDDHQPFMYVGFDHQLGTQHIENYYKEKAATGSKYSVLYFSEGYISDARGDTFIEEMSHHDGYKLSSSFYTKAT
RESGFNAAMNAVEKDPDISFIYACSTDVALGAVDALKQLKRGDILVNGWGGGTAELEAIEQGDIDVTVMRMNDDTGIAMA
EAIKWDLEGKQVPHVYSGDFEVVTSADSGEKIERLKRRAFRYSDQ

Nucleotide

• Length: 1098 bp

>NTDB_id=879581 RJD38_RS19790 WP_005599399.1 1074471..1075568(-) (luxP) [Vibrio scophthalmi strain 20FBVib0200]
ATGTATAAAACGGCTCTAGCTACGCTACTGTCTGTCTTCTCGTCCGTCGCGTTAGCGCATTCAACTCAAGTGTTAAACGG
CTATTGGGAATACGATGAATATTTGTCGTCTCATCCAAGTCAAAAGGCCTTAACGGGTAAGCTCGCGCAAGCGGTGAGAG
AGCATCCTGCAGCTATCAATGAAGTGCAAGATAGACCAATCTCAATCTCGGTAGTCTATCCAGGACAGCAAATCTCAGAC
TACTGGATTCGAAATATCAAAGCGTTTGAAGCTCGCTTAGATAAGTTAGGTATTAAGTATGAGATTAATCAGGTGTTTAC
TCGACCGAATGTCGATGTACGACAGCAAAGCTTGTCACTGCTTGAAGCAATTCAGAATAATTCTGATTACCTCATTTTTA
CACTAGATACCACTCGCCATCGAAAATTTATCGAACACGTGATTAGCTCGACCGACACTAAACTCATTTTGCAGAATATT
ACCACGCCAGTGCGCGCTTGGGATGATCATCAGCCATTTATGTATGTTGGTTTTGACCACCAGCTTGGCACACAGCACAT
CGAAAACTACTACAAAGAAAAAGCCGCAACCGGCAGTAAGTATTCCGTGTTGTACTTTTCAGAAGGCTACATTAGTGATG
CGCGTGGAGATACCTTCATTGAAGAGATGAGCCATCATGACGGCTATAAGTTAAGTTCTTCATTCTACACCAAAGCGACC
AGAGAATCGGGTTTCAACGCAGCCATGAATGCGGTGGAGAAGGATCCGGATATTTCATTTATTTATGCTTGTTCAACCGA
TGTCGCACTGGGTGCCGTCGATGCGTTAAAACAGCTTAAACGTGGCGATATTTTGGTTAACGGCTGGGGGGGAGGCACTG
CTGAGTTAGAGGCGATTGAACAAGGTGATATTGATGTGACGGTGATGCGTATGAACGATGACACCGGCATAGCGATGGCT
GAGGCCATTAAGTGGGACTTAGAAGGTAAGCAAGTTCCACATGTTTATTCGGGCGACTTTGAAGTGGTAACGAGTGCCGA
CAGCGGTGAAAAAATCGAACGCTTAAAGCGTCGTGCATTTAGGTACTCAGACCAATAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-324)

3D structure

• AlphaFold DB: A0A1C7FG75

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	64.641	99.178	0.641