Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | RIN70_RS09660 | Genome accession | NZ_CP134147 |
| Coordinates | 1974191..1976620 (-) | Length | 809 a.a. |
| NCBI ID | WP_049485777.1 | Uniprot ID | A0A6I3PDV9 |
| Organism | Streptococcus parasanguinis strain 30.8.10 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1969191..1981620
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RIN70_RS09625 (RIN70_09625) | - | 1969383..1970069 (-) | 687 | WP_195623682.1 | YoaK family protein | - |
| RIN70_RS09630 (RIN70_09630) | - | 1970199..1970975 (-) | 777 | WP_195623681.1 | NUDIX hydrolase | - |
| RIN70_RS09635 (RIN70_09635) | - | 1971000..1971191 (-) | 192 | Protein_1852 | hypothetical protein | - |
| RIN70_RS09640 (RIN70_09640) | - | 1971202..1972263 (-) | 1062 | WP_195623680.1 | AAA family ATPase | - |
| RIN70_RS09645 (RIN70_09645) | - | 1972428..1973144 (-) | 717 | WP_313790570.1 | hypothetical protein | - |
| RIN70_RS09650 (RIN70_09650) | - | 1973308..1973715 (-) | 408 | WP_070587783.1 | DUF4430 domain-containing protein | - |
| RIN70_RS09655 (RIN70_09655) | - | 1973693..1974181 (-) | 489 | WP_313790571.1 | ECF transporter S component | - |
| RIN70_RS09660 (RIN70_09660) | clpC | 1974191..1976620 (-) | 2430 | WP_049485777.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| RIN70_RS09665 (RIN70_09665) | - | 1976621..1977085 (-) | 465 | WP_195623676.1 | CtsR family transcriptional regulator | - |
| RIN70_RS09670 (RIN70_09670) | - | 1977303..1981013 (-) | 3711 | WP_272144351.1 | alpha-L-fucosidase | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 89684.17 Da Isoelectric Point: 5.4184
>NTDB_id=878887 RIN70_RS09660 WP_049485777.1 1974191..1976620(-) (clpC) [Streptococcus parasanguinis strain 30.8.10]
MNYSTALLESIEAAQILAGHYQGHTLDTWHLLTAMANNPYSVAGSVLNDYPMQIDEFQDAAEHITGQAFQSDNRYEIFPF
SYRMEAIMKHAREIAQVLHAKTLGTEHVLLSLLADRGTLASQVMEFAGFAFTEQDKGVPIASLRKNLEDKAGWDKNDIKA
IRSLYRAQNPNRQTMGNMMGMPPSTSGGLEDYTRDLTEMARAGQLEPVIGRDAEISRMIQILSRKTKNNPVLVGEAGVGK
TALALGLAQRVASGNVPAEIAQMRVLELDLMNVVAGTRFRGDFEERMNNIIQDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQDEYQKHIEKDAALSRRFAKVTIEEPSVADSIQILQGLKETYQDHHHVTITDEAIET
AVKYAHRYLTSRQLPDSAIDLLDEAAATVQNRDSNGHVKEELTALDRALMDGKWKKAAQLLEVEAAPIVYKKEVTDQDVL
VTLSQLSGIPTQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSE
DMQQVVKVMVKPLIATLAEQGMTLKFQPSALKLLATKGYDPEMGARPLRRVLQTEVEDQLAELLLKGQAQEGQTIKVGTT
AGTIKFEIV
MNYSTALLESIEAAQILAGHYQGHTLDTWHLLTAMANNPYSVAGSVLNDYPMQIDEFQDAAEHITGQAFQSDNRYEIFPF
SYRMEAIMKHAREIAQVLHAKTLGTEHVLLSLLADRGTLASQVMEFAGFAFTEQDKGVPIASLRKNLEDKAGWDKNDIKA
IRSLYRAQNPNRQTMGNMMGMPPSTSGGLEDYTRDLTEMARAGQLEPVIGRDAEISRMIQILSRKTKNNPVLVGEAGVGK
TALALGLAQRVASGNVPAEIAQMRVLELDLMNVVAGTRFRGDFEERMNNIIQDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQDEYQKHIEKDAALSRRFAKVTIEEPSVADSIQILQGLKETYQDHHHVTITDEAIET
AVKYAHRYLTSRQLPDSAIDLLDEAAATVQNRDSNGHVKEELTALDRALMDGKWKKAAQLLEVEAAPIVYKKEVTDQDVL
VTLSQLSGIPTQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSE
DMQQVVKVMVKPLIATLAEQGMTLKFQPSALKLLATKGYDPEMGARPLRRVLQTEVEDQLAELLLKGQAQEGQTIKVGTT
AGTIKFEIV
Nucleotide
Download Length: 2430 bp
>NTDB_id=878887 RIN70_RS09660 WP_049485777.1 1974191..1976620(-) (clpC) [Streptococcus parasanguinis strain 30.8.10]
ATGAACTATTCAACAGCACTGTTAGAAAGTATAGAAGCGGCCCAAATACTAGCAGGCCACTATCAGGGGCATACCTTAGA
TACTTGGCATCTCCTGACGGCTATGGCCAATAATCCCTATAGCGTGGCAGGTTCTGTACTTAACGATTATCCTATGCAGA
TCGATGAGTTTCAGGATGCAGCGGAGCATATTACAGGCCAAGCTTTTCAAAGCGACAATCGGTATGAAATCTTCCCATTT
TCTTATCGGATGGAAGCCATTATGAAACACGCAAGAGAGATTGCCCAGGTCCTTCATGCCAAGACCTTGGGAACAGAGCA
TGTGCTCCTCTCTCTTCTAGCAGACCGTGGGACCTTGGCGAGCCAGGTCATGGAGTTTGCCGGCTTTGCCTTTACAGAGC
AAGACAAGGGAGTTCCTATTGCCTCCCTTCGCAAGAATTTAGAAGACAAGGCAGGCTGGGACAAGAATGATATCAAAGCC
ATTCGGAGTCTCTATCGCGCCCAAAACCCTAACCGCCAAACCATGGGAAATATGATGGGCATGCCCCCAAGCACCAGTGG
AGGTCTCGAGGATTATACTCGTGATTTGACAGAAATGGCGCGTGCAGGCCAGCTTGAGCCTGTGATCGGCCGGGATGCAG
AGATTTCACGCATGATCCAAATCCTTAGCCGCAAGACCAAGAACAATCCTGTATTGGTGGGAGAAGCAGGGGTCGGGAAA
ACCGCCCTTGCATTAGGTCTGGCCCAGCGGGTCGCTAGTGGCAATGTTCCAGCTGAAATAGCGCAAATGCGTGTCTTAGA
ATTGGATCTCATGAATGTCGTTGCAGGGACGCGCTTCCGTGGGGACTTCGAAGAGCGGATGAACAATATCATCCAGGACA
TCGAAGAAGACGGTCACGTGATTCTCTTTATCGATGAACTGCATACTATTATGGGGTCAGGATCCGGTATTGATTCGACC
TTAGACGCAGCCAATATTCTAAAACCAGCCCTGGCACGGGGAACCTTGCGTACAGTTGGGGCAACGACCCAAGATGAGTA
CCAAAAGCATATCGAAAAAGATGCAGCCCTCTCTCGGCGTTTTGCGAAAGTCACCATTGAAGAGCCAAGTGTTGCAGATA
GCATCCAAATTCTCCAAGGCTTGAAAGAGACTTATCAGGACCACCATCATGTGACCATTACCGATGAAGCGATCGAAACA
GCTGTCAAATATGCCCACCGCTATTTGACTAGTCGTCAATTGCCAGATTCAGCCATTGATCTCTTGGATGAAGCGGCAGC
TACCGTACAAAACCGCGATTCCAACGGTCACGTAAAAGAAGAGTTGACCGCCTTGGATCGGGCCTTGATGGATGGCAAGT
GGAAGAAAGCAGCCCAGCTCTTAGAAGTAGAGGCCGCTCCCATTGTCTACAAAAAAGAAGTCACTGACCAAGATGTCTTG
GTGACCTTGAGCCAATTATCCGGTATTCCAACTCAAAAACTGACCCAAACCGATGCCAAGAAGTACCTAAACTTAGAAGC
AGAATTGCATAAGCGCGTGATTGGTCAAGACCAAGCCGTTTCGAGTATCAGTCGGGCTATTCGACGCAATCAATCAGGTA
TCCGTAGCAATAAACGTCCGATCGGTTCTTTCATGTTCCTAGGACCTACCGGTGTCGGAAAAACAGAGCTAGCCAAAGCT
TTGGCGGAAGTTTTGTTTGATGATGAATCGGCCCTCATCCGTTTTGATATGAGTGAGTACATGGAAAAATTCGCGGCGAG
TCGCCTCAACGGAGCTCCTCCAGGCTATGTGGGCTACGAAGAAGGAGGCGAGTTGACCGAGAAAGTCCGCAACAAACCAT
ATTCAGTTCTCTTATTTGATGAGGTGGAAAAAGCCCATCCAGATATTTTCAATGTCCTTTTGCAAGTCTTGGATGACGGA
GTCTTAACCGATAGCAAAGGCCGGAAGATCGACTTCTCCAATACCATTATCATCATGACCTCAAACCTGGGAGCAACAGC
CCTTCGGGATGATAAGACAGTTGGCTTTGGTGCTAAAGATATCCGCTTTGACCAAGCCAATATGGAAAAACGCATGTTTG
AAGAGTTGAAGAAGACCTATCGTCCAGAGTTTATCAACCGGATTGATGAAAAGGTGGTCTTCCATAGTCTCTCAAGCGAG
GACATGCAGCAGGTAGTGAAAGTCATGGTCAAACCGCTCATCGCGACCTTGGCCGAACAAGGCATGACCCTCAAATTCCA
GCCTTCAGCGCTCAAGTTGCTAGCAACCAAAGGCTACGATCCAGAAATGGGAGCTCGCCCACTGCGTCGTGTCTTGCAGA
CCGAAGTGGAAGATCAACTAGCAGAGCTATTGCTGAAAGGCCAAGCCCAAGAAGGGCAAACCATCAAGGTTGGAACGACA
GCCGGAACGATCAAGTTTGAGATTGTCTAG
ATGAACTATTCAACAGCACTGTTAGAAAGTATAGAAGCGGCCCAAATACTAGCAGGCCACTATCAGGGGCATACCTTAGA
TACTTGGCATCTCCTGACGGCTATGGCCAATAATCCCTATAGCGTGGCAGGTTCTGTACTTAACGATTATCCTATGCAGA
TCGATGAGTTTCAGGATGCAGCGGAGCATATTACAGGCCAAGCTTTTCAAAGCGACAATCGGTATGAAATCTTCCCATTT
TCTTATCGGATGGAAGCCATTATGAAACACGCAAGAGAGATTGCCCAGGTCCTTCATGCCAAGACCTTGGGAACAGAGCA
TGTGCTCCTCTCTCTTCTAGCAGACCGTGGGACCTTGGCGAGCCAGGTCATGGAGTTTGCCGGCTTTGCCTTTACAGAGC
AAGACAAGGGAGTTCCTATTGCCTCCCTTCGCAAGAATTTAGAAGACAAGGCAGGCTGGGACAAGAATGATATCAAAGCC
ATTCGGAGTCTCTATCGCGCCCAAAACCCTAACCGCCAAACCATGGGAAATATGATGGGCATGCCCCCAAGCACCAGTGG
AGGTCTCGAGGATTATACTCGTGATTTGACAGAAATGGCGCGTGCAGGCCAGCTTGAGCCTGTGATCGGCCGGGATGCAG
AGATTTCACGCATGATCCAAATCCTTAGCCGCAAGACCAAGAACAATCCTGTATTGGTGGGAGAAGCAGGGGTCGGGAAA
ACCGCCCTTGCATTAGGTCTGGCCCAGCGGGTCGCTAGTGGCAATGTTCCAGCTGAAATAGCGCAAATGCGTGTCTTAGA
ATTGGATCTCATGAATGTCGTTGCAGGGACGCGCTTCCGTGGGGACTTCGAAGAGCGGATGAACAATATCATCCAGGACA
TCGAAGAAGACGGTCACGTGATTCTCTTTATCGATGAACTGCATACTATTATGGGGTCAGGATCCGGTATTGATTCGACC
TTAGACGCAGCCAATATTCTAAAACCAGCCCTGGCACGGGGAACCTTGCGTACAGTTGGGGCAACGACCCAAGATGAGTA
CCAAAAGCATATCGAAAAAGATGCAGCCCTCTCTCGGCGTTTTGCGAAAGTCACCATTGAAGAGCCAAGTGTTGCAGATA
GCATCCAAATTCTCCAAGGCTTGAAAGAGACTTATCAGGACCACCATCATGTGACCATTACCGATGAAGCGATCGAAACA
GCTGTCAAATATGCCCACCGCTATTTGACTAGTCGTCAATTGCCAGATTCAGCCATTGATCTCTTGGATGAAGCGGCAGC
TACCGTACAAAACCGCGATTCCAACGGTCACGTAAAAGAAGAGTTGACCGCCTTGGATCGGGCCTTGATGGATGGCAAGT
GGAAGAAAGCAGCCCAGCTCTTAGAAGTAGAGGCCGCTCCCATTGTCTACAAAAAAGAAGTCACTGACCAAGATGTCTTG
GTGACCTTGAGCCAATTATCCGGTATTCCAACTCAAAAACTGACCCAAACCGATGCCAAGAAGTACCTAAACTTAGAAGC
AGAATTGCATAAGCGCGTGATTGGTCAAGACCAAGCCGTTTCGAGTATCAGTCGGGCTATTCGACGCAATCAATCAGGTA
TCCGTAGCAATAAACGTCCGATCGGTTCTTTCATGTTCCTAGGACCTACCGGTGTCGGAAAAACAGAGCTAGCCAAAGCT
TTGGCGGAAGTTTTGTTTGATGATGAATCGGCCCTCATCCGTTTTGATATGAGTGAGTACATGGAAAAATTCGCGGCGAG
TCGCCTCAACGGAGCTCCTCCAGGCTATGTGGGCTACGAAGAAGGAGGCGAGTTGACCGAGAAAGTCCGCAACAAACCAT
ATTCAGTTCTCTTATTTGATGAGGTGGAAAAAGCCCATCCAGATATTTTCAATGTCCTTTTGCAAGTCTTGGATGACGGA
GTCTTAACCGATAGCAAAGGCCGGAAGATCGACTTCTCCAATACCATTATCATCATGACCTCAAACCTGGGAGCAACAGC
CCTTCGGGATGATAAGACAGTTGGCTTTGGTGCTAAAGATATCCGCTTTGACCAAGCCAATATGGAAAAACGCATGTTTG
AAGAGTTGAAGAAGACCTATCGTCCAGAGTTTATCAACCGGATTGATGAAAAGGTGGTCTTCCATAGTCTCTCAAGCGAG
GACATGCAGCAGGTAGTGAAAGTCATGGTCAAACCGCTCATCGCGACCTTGGCCGAACAAGGCATGACCCTCAAATTCCA
GCCTTCAGCGCTCAAGTTGCTAGCAACCAAAGGCTACGATCCAGAAATGGGAGCTCGCCCACTGCGTCGTGTCTTGCAGA
CCGAAGTGGAAGATCAACTAGCAGAGCTATTGCTGAAAGGCCAAGCCCAAGAAGGGCAAACCATCAAGGTTGGAACGACA
GCCGGAACGATCAAGTTTGAGATTGTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae TIGR4 |
76.942 |
100 |
0.771 |
| clpC | Streptococcus pneumoniae Rx1 |
76.942 |
100 |
0.771 |
| clpC | Streptococcus pneumoniae D39 |
76.942 |
100 |
0.771 |
| clpC | Streptococcus mutans UA159 |
66.218 |
100 |
0.669 |
| clpC | Streptococcus thermophilus LMG 18311 |
64.742 |
100 |
0.651 |
| clpC | Streptococcus thermophilus LMD-9 |
64.742 |
100 |
0.651 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.601 |
100 |
0.52 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.238 |
98.64 |
0.446 |
| clpE | Streptococcus mutans UA159 |
47.687 |
77.503 |
0.37 |
| clpE | Streptococcus pneumoniae Rx1 |
45.763 |
80.222 |
0.367 |
| clpE | Streptococcus pneumoniae D39 |
45.763 |
80.222 |
0.367 |
| clpE | Streptococcus pneumoniae R6 |
45.763 |
80.222 |
0.367 |
| clpE | Streptococcus pneumoniae TIGR4 |
45.763 |
80.222 |
0.367 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
45.625 |
79.11 |
0.361 |