NTDB

Overview

Name	pptA	Type	Regulator
Locus tag	RIN70_RS02550	Genome accession	NZ_CP134147
Coordinates	486132..486863 (+)	Length	243 a.a.
NCBI ID	WP_021154515.1	Uniprot ID	A0AAE8DHV9
Organism	Streptococcus parasanguinis strain 30.8.10
Function	export ComS (predicted from homology) Competence regulation

Genomic Context

Location: 481132..491863

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RIN70_RS02520 (RIN70_02520)	-	481543..482964 (+)	1422	WP_070464909.1	NCS2 family permease	-
RIN70_RS02525 (RIN70_02525)	tsaE	483141..483596 (+)	456	WP_045760248.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	-
RIN70_RS02530 (RIN70_02530)	-	483589..484119 (+)	531	WP_049472478.1	GNAT family N-acetyltransferase	-
RIN70_RS02535 (RIN70_02535)	brpA	484133..485326 (+)	1194	WP_129299730.1	biofilm formation/cell division transcriptional regulator BrpA	-
RIN70_RS02540 (RIN70_02540)	-	485348..485638 (-)	291	WP_003012641.1	hypothetical protein	-
RIN70_RS02545 (RIN70_02545)	-	485651..486064 (-)	414	WP_129299731.1	HIT family protein	-
RIN70_RS02550 (RIN70_02550)	pptA	486132..486863 (+)	732	WP_021154515.1	ABC transporter ATP-binding protein	Regulator
RIN70_RS02555 (RIN70_02555)	-	486860..487915 (+)	1056	WP_195623608.1	ABC transporter permease	-
RIN70_RS02560 (RIN70_02560)	ccrZ	487956..488750 (+)	795	WP_003003852.1	cell cycle regulator CcrZ	-
RIN70_RS02565 (RIN70_02565)	trmB	488747..489382 (+)	636	WP_031575233.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	-
RIN70_RS02570 (RIN70_02570)	rimP	489480..489959 (+)	480	WP_070449014.1	ribosome maturation factor RimP	-
RIN70_RS02575 (RIN70_02575)	nusA	490004..491146 (+)	1143	WP_031575236.1	transcription termination factor NusA	-
RIN70_RS02580 (RIN70_02580)	rnpM	491161..491457 (+)	297	WP_155125296.1	RNase P modulator RnpM	-
RIN70_RS02585 (RIN70_02585)	-	491450..491749 (+)	300	WP_045760253.1	YlxQ-related RNA-binding protein	-

Sequence

Protein

Download Length: 243 a.a. Molecular weight: 26993.28 Da Isoelectric Point: 4.5112

                                >NTDB_id=878854 RIN70_RS02550 WP_021154515.1 486132..486863(+) (pptA) [Streptococcus parasanguinis strain 30.8.10]

MLEINKLTGGYVNIPVLKEVSFSVPDGQLIGLIGLNGAGKSTTINEIIGLLHPYAGEVRIDGLSLPEAPTDYRKKIGYIP

ETPSLYEELTLREHIETVAMAYDLDMDQVMVRVQPLLERFRLAEKLDWFPTQFSKGMKQKVMIICAYAVDPSLYIVDEPF

LGLDPVAIADLIQLLADEKAKGKSILMSTHVLDSAEKMCDGFVILHKGQIRAKGTLDELRSTFGDEKASLNDIYMTLTEE

ETA

Nucleotide

Download Length: 732 bp

                                >NTDB_id=878854 RIN70_RS02550 WP_021154515.1 486132..486863(+) (pptA) [Streptococcus parasanguinis strain 30.8.10]

ATGTTAGAAATCAACAAGTTGACAGGGGGCTATGTCAACATCCCTGTCCTGAAAGAGGTGAGTTTTTCAGTTCCGGATGG

CCAACTGATTGGTTTGATTGGACTAAATGGAGCTGGGAAGTCAACCACAATTAATGAAATTATTGGTCTCCTGCATCCTT

ATGCTGGGGAAGTACGGATTGACGGCCTGAGCCTTCCAGAAGCTCCAACTGACTATCGTAAAAAAATTGGCTATATTCCA

GAAACCCCTAGTCTATATGAAGAATTAACCTTGCGAGAGCATATCGAGACCGTAGCTATGGCCTATGATTTAGACATGGA

TCAGGTCATGGTGCGCGTCCAGCCTTTGTTGGAACGATTCCGTTTGGCTGAAAAATTAGATTGGTTCCCGACCCAGTTTT

CAAAAGGGATGAAGCAAAAGGTCATGATTATTTGCGCCTATGCAGTGGATCCAAGTCTTTATATTGTCGATGAACCCTTT

TTGGGATTGGATCCTGTTGCGATTGCAGATTTGATTCAGTTATTGGCAGATGAGAAAGCAAAAGGAAAATCGATTTTGAT

GAGTACCCACGTTCTGGATTCGGCTGAAAAGATGTGTGATGGTTTTGTGATCCTCCATAAGGGGCAGATCCGAGCAAAAG

GGACCTTGGACGAGCTGCGTTCAACTTTTGGGGATGAGAAAGCAAGTCTAAATGATATCTACATGACCTTGACAGAAGAG

GAAACAGCATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
pptA	Streptococcus salivarius strain HSISS4	75.519	99.177	0.749
pptA	Streptococcus thermophilus LMD-9	75.519	99.177	0.749

Detailed information NTG0878854