Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   WOC71_RS14385 Genome accession   NZ_CP150754
Coordinates   2841397..2842671 (-) Length   424 a.a.
NCBI ID   WP_406818747.1    Uniprot ID   -
Organism   Staphylococcus aureus strain TUM22457     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2836397..2847671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WOC71_RS14370 (WOC71_14360) - 2838682..2838774 (+) 93 WP_031761401.1 hypothetical protein -
  WOC71_RS14375 (WOC71_14365) - 2838754..2839659 (-) 906 WP_000184370.1 transglycosylase domain-containing protein -
  WOC71_RS14380 (WOC71_14370) tyrS 2840041..2841303 (+) 1263 WP_000186029.1 tyrosine--tRNA ligase -
  WOC71_RS14385 (WOC71_14375) htrA 2841397..2842671 (-) 1275 WP_406818747.1 S1C family serine protease Regulator
  WOC71_RS14390 (WOC71_14380) - 2842843..2843460 (+) 618 WP_406818748.1 lysophospholipid acyltransferase family protein -
  WOC71_RS14395 (WOC71_14385) nagE 2843588..2845054 (+) 1467 WP_042109272.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  WOC71_RS14400 (WOC71_14390) - 2845161..2846291 (+) 1131 WP_216766839.1 HAD family hydrolase -
  WOC71_RS14405 (WOC71_14395) - 2846252..2846347 (-) 96 WP_031761395.1 hypothetical protein -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 45816.03 Da        Isoelectric Point: 10.0363

>NTDB_id=878720 WOC71_RS14385 WP_406818747.1 2841397..2842671(-) (htrA) [Staphylococcus aureus strain TUM22457]
MSDFNHTNHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKVVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLLGINSMKIAATQVEGIGFAIPSNEVKLTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDREDGIYVAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGDRDFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=878720 WOC71_RS14385 WP_406818747.1 2841397..2842671(-) (htrA) [Staphylococcus aureus strain TUM22457]
ATGTCAGATTTTAATCATACAAATCATTCTACAACAAACCATAGCCAAACACCTAGATACAGAAGACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATTATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTTCAGACAACAAATAATAAAGGTGGCAATCAATTAGACGGTCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTTATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCTGGAGTAGGTTCAGGTGTTATCTATCAAATAAACA
ACAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTAAAGCGAAAGTAGTTGGTAAAGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTTGCCAACTCTTCAAAAGTACAAACTGGCGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGCGAACGTACGATTGACGCTGAGACAACTGGTGGCAATACAAAA
GTTAGCGTTCTTCAAACAGATGCTGCTATTAACCCAGGTAACTCAGGTGGCGCATTAGTAGATATTAATGGTAATTTACT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATCGGGTTTGCTATTCCAAGTAATGAAGTTAAATTAA
CAATTGAACAACTTGTAAAACATGGTAAAATTGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATTCCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGAGAAGACGGTATTTATGTCGCCAAAGCTGATAGTGATATTGATCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAACCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGTCAAAGCCGATCAGAACGTCAATCACCTGGCCAAGGCGATAGAGATTTCTTTAGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

38.806

94.811

0.368