Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   RI106_RS10275 Genome accession   NZ_CP134071
Coordinates   2122008..2122895 (+) Length   295 a.a.
NCBI ID   WP_000143426.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 4233     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2117008..2127895
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RI106_RS10245 (RI106_10245) - 2117740..2118501 (+) 762 WP_045172621.1 alpha/beta hydrolase family protein -
  RI106_RS10250 (RI106_10250) - 2118746..2119201 (+) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  RI106_RS10255 (RI106_10255) - 2119323..2119424 (+) 102 WP_000731972.1 SE2200 family small protein -
  RI106_RS10260 (RI106_10260) - 2119484..2120908 (-) 1425 WP_000953747.1 alkaline phosphatase -
  RI106_RS10265 (RI106_10265) - 2121106..2121306 (+) 201 WP_000604727.1 hypothetical protein -
  RI106_RS10270 (RI106_10270) braR 2121332..2121997 (+) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  RI106_RS10275 (RI106_10275) braS 2122008..2122895 (+) 888 WP_000143426.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  RI106_RS10280 (RI106_10280) - 2123004..2123759 (+) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  RI106_RS10285 (RI106_10285) - 2123756..2125756 (+) 2001 WP_000776753.1 ABC transporter permease -
  RI106_RS10290 (RI106_10290) - 2126415..2126528 (+) 114 WP_072384844.1 hypothetical protein -
  RI106_RS10295 (RI106_10295) - 2126910..2127170 (+) 261 WP_001791974.1 hypothetical protein -
  RI106_RS10300 (RI106_10300) - 2127180..2127677 (+) 498 WP_001065268.1 glutathione peroxidase -
  RI106_RS10305 (RI106_10305) - 2127785..2127877 (-) 93 WP_010956583.1 hypothetical protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34032.32 Da        Isoelectric Point: 5.8962

>NTDB_id=878697 RI106_RS10275 WP_000143426.1 2122008..2122895(+) (braS) [Staphylococcus aureus strain 4233]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLETALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=878697 RI106_RS10275 WP_000143426.1 2122008..2122895(+) (braS) [Staphylococcus aureus strain 4233]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAACTGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTTAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGTCAAAGTAACTCAAGTGGGATTGGCTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.661

100

0.997