Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   WOC71_RS08580 Genome accession   NZ_CP150754
Coordinates   1691764..1692564 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain TUM22457     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1686764..1697564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WOC71_RS08565 (WOC71_08560) walK 1687433..1689259 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  WOC71_RS08570 (WOC71_08565) yycH 1689252..1690586 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  WOC71_RS08575 (WOC71_08570) - 1690587..1691375 (+) 789 WP_001104165.1 two-component system regulatory protein YycI -
  WOC71_RS08580 (WOC71_08575) vicX 1691764..1692564 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  WOC71_RS08585 (WOC71_08580) adsA 1692791..1695109 (+) 2319 WP_000645787.1 LPXTG-anchored adenosine synthase AdsA -
  WOC71_RS08590 (WOC71_08585) rlmH 1695477..1695956 (+) 480 WP_368409899.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  WOC71_RS08595 (WOC71_08590) - 1696506..1696739 (-) 234 WP_000400093.1 hypothetical protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=878694 WOC71_RS08580 WP_000088649.1 1691764..1692564(+) (vicX) [Staphylococcus aureus strain TUM22457]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=878694 WOC71_RS08580 WP_000088649.1 1691764..1692564(+) (vicX) [Staphylococcus aureus strain TUM22457]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGATGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGACAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474