Detailed information NTG0878456

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: RI644_RS03945
• Genome accession: NZ_CP134057
• Coordinates: 827822..828916 (+)
• Length: 364 a.a.
• NCBI ID: WP_000823678.1
• Uniprot ID: Q9KLK6
• Organism: Vibrio cholerae strain VIC11-A
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 822822..833916

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RI644_RS03915 (RI644_03915)	-	823965..824216 (-)	252	WP_001882582.1	YgjV family protein	-
RI644_RS03920 (RI644_03920)	-	824629..824949 (-)	321	WP_001089529.1	DUF496 family protein	-
RI644_RS03925 (RI644_03925)	-	825137..825334 (+)	198	WP_001246071.1	hypothetical protein	-
RI644_RS03930 (RI644_03930)	-	825376..826026 (+)	651	WP_001025631.1	YceH family protein	-
RI644_RS03935 (RI644_03935)	-	826043..826348 (+)	306	Protein_781	GIY-YIG nuclease family protein	-
RI644_RS03940 (RI644_03940)	traF	826450..827610 (+)	1161	WP_001025860.1	conjugal transfer protein TraF	-
RI644_RS03945 (RI644_03945)	luxP	827822..828916 (+)	1095	WP_000823678.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
RI644_RS03950 (RI644_03950)	luxQ	828934..831507 (+)	2574	WP_001026306.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
RI644_RS03955 (RI644_03955)	-	831499..832164 (-)	666	WP_000268204.1	flagellar brake protein	-
RI644_RS03960 (RI644_03960)	-	832408..832926 (-)	519	WP_000914961.1	hypothetical protein	-
RI644_RS03965 (RI644_03965)	-	833178..833576 (-)	399	WP_000831416.1	YgiW/YdeI family stress tolerance OB fold protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 41196.81 Da
• Isoelectric Point: 6.3129

>NTDB_id=878456 RI644_RS03945 WP_000823678.1 827822..828916(+) (luxP) [Vibrio cholerae strain VIC11-A]
MKRKLISPLFLIAALFSSTGQADSLKGYWHYDEFLAEFPEQRPISELFAQTVRDKPSALTVAQEQPVIISVVYPGQQISD
YWVRNIKAFEKRMDALGIRYQINQVFTRPNLDTRQQSVSLMEALKNKSDYLIFTLDTTRHRKFIEHVLHSSETKLILQNI
TTPVKDWQGKQPMMYIGFDHEYGAQLLAQYYQAHAPKKPYSVLYFSEGYISEARGDTFIQDMNAVHHFPLASSYYTKATE
QSGYEATLNIVKNNPEIGFIYACATDVALGAAQALKELNRQDILVNGWGGGSAELEALAKGELDVTVMRMNDDTGVAMAE
AIKWDLEGKSVPLVYSGDFEVVTKQDSAARIAELKARAFRYSDR

Nucleotide

• Length: 1095 bp

>NTDB_id=878456 RI644_RS03945 WP_000823678.1 827822..828916(+) (luxP) [Vibrio cholerae strain VIC11-A]
ATGAAAAGAAAGCTAATATCTCCGCTGTTTCTGATAGCAGCACTCTTCAGCTCAACTGGTCAAGCCGATTCATTAAAAGG
CTATTGGCATTATGATGAATTTCTTGCTGAGTTCCCTGAACAGCGGCCAATTTCCGAGCTTTTTGCTCAAACAGTTCGTG
ATAAACCGAGTGCGTTGACGGTGGCGCAAGAACAACCCGTCATTATTTCGGTGGTCTATCCCGGACAGCAAATTTCTGAC
TATTGGGTTCGCAACATCAAAGCGTTTGAAAAGCGAATGGATGCTTTGGGGATTCGCTATCAAATCAATCAGGTGTTTAC
TCGCCCGAATCTTGATACTCGCCAGCAGAGTGTTTCCTTGATGGAAGCGCTGAAAAATAAGAGCGACTATCTGATTTTTA
CCTTAGATACCACCCGTCACCGCAAATTCATTGAGCATGTGCTGCACTCCTCCGAAACGAAACTGATTTTGCAAAACATC
ACGACGCCAGTCAAAGATTGGCAAGGCAAGCAGCCCATGATGTACATCGGTTTTGATCATGAGTACGGTGCGCAATTATT
GGCGCAATATTACCAAGCACATGCTCCGAAAAAGCCGTACTCAGTACTTTATTTTTCCGAGGGGTATATCAGTGAAGCGC
GGGGAGACACCTTCATTCAAGATATGAACGCGGTGCACCATTTTCCGTTGGCTTCTTCCTATTACACCAAGGCAACCGAA
CAAAGTGGCTATGAAGCGACCCTAAACATCGTCAAGAATAATCCAGAAATTGGCTTTATTTACGCCTGTGCGACGGACGT
CGCTTTGGGAGCTGCGCAGGCACTGAAAGAGCTGAATCGACAAGATATTCTGGTCAATGGTTGGGGAGGCGGTTCGGCAG
AGCTTGAAGCGCTTGCCAAAGGAGAATTGGATGTCACTGTGATGCGTATGAATGACGATACGGGTGTGGCGATGGCTGAA
GCGATTAAATGGGATTTGGAAGGGAAATCCGTACCTTTGGTCTATTCAGGCGATTTTGAAGTGGTCACCAAACAAGATTC
AGCAGCACGTATTGCAGAACTGAAAGCTCGGGCTTTCCGTTATTCGGATCGTTAG

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-323)

3D structure

• AlphaFold DB: Q9KLK6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	100	100	1