Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   RGB74_RS11905 Genome accession   NZ_CP134049
Coordinates   2406651..2406830 (-) Length   59 a.a.
NCBI ID   WP_310759520.1    Uniprot ID   -
Organism   Bacillus sp. NEB1478     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2401651..2411830
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RGB74_RS11880 (RGB74_11880) trpS 2401738..2402727 (+) 990 WP_310759515.1 tryptophan--tRNA ligase -
  RGB74_RS11885 (RGB74_11885) - 2403025..2403771 (-) 747 WP_310759516.1 YjbA family protein -
  RGB74_RS11890 (RGB74_11890) fabF 2403909..2405147 (-) 1239 WP_310759517.1 beta-ketoacyl-ACP synthase II -
  RGB74_RS11895 (RGB74_11895) - 2405191..2406123 (-) 933 WP_310759518.1 beta-ketoacyl-ACP synthase III -
  RGB74_RS11900 (RGB74_11900) - 2406312..2406614 (+) 303 WP_310759519.1 YppG family protein -
  RGB74_RS11905 (RGB74_11905) comZ 2406651..2406830 (-) 180 WP_310759520.1 ComZ family protein Regulator
  RGB74_RS11910 (RGB74_11910) - 2406918..2407811 (-) 894 WP_310759521.1 NAD(P)-dependent oxidoreductase -
  RGB74_RS11915 (RGB74_11915) - 2407929..2408669 (-) 741 WP_310759522.1 alpha/beta hydrolase -
  RGB74_RS11920 (RGB74_11920) - 2409083..2409262 (+) 180 WP_310759523.1 YjzD family protein -
  RGB74_RS11925 (RGB74_11925) - 2409343..2409522 (-) 180 WP_310759524.1 YjzC family protein -
  RGB74_RS11930 (RGB74_11930) - 2409615..2409944 (-) 330 WP_310759525.1 hypothetical protein -
  RGB74_RS11935 (RGB74_11935) - 2410189..2410350 (+) 162 WP_310759526.1 hypothetical protein -
  RGB74_RS11940 (RGB74_11940) moaD 2410357..2410596 (-) 240 WP_310759527.1 molybdopterin converting factor subunit 1 -
  RGB74_RS11945 (RGB74_11945) - 2410602..2411060 (-) 459 WP_310759528.1 molybdenum cofactor biosynthesis protein MoaE -
  RGB74_RS11950 (RGB74_11950) mobB 2411047..2411589 (-) 543 WP_310759529.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 6800.00 Da        Isoelectric Point: 4.3885

>NTDB_id=878381 RGB74_RS11905 WP_310759520.1 2406651..2406830(-) (comZ) [Bacillus sp. NEB1478]
MNNELNMKLMQIAMTHLPEAKAFFEQKGIELGMEDIQPMLQLLMNVMNDAYELGKAENK

Nucleotide


Download         Length: 180 bp        

>NTDB_id=878381 RGB74_RS11905 WP_310759520.1 2406651..2406830(-) (comZ) [Bacillus sp. NEB1478]
ATGAATAACGAACTTAACATGAAACTTATGCAGATTGCCATGACACATCTGCCGGAAGCAAAAGCTTTTTTTGAGCAAAA
AGGAATTGAGCTTGGTATGGAAGATATTCAGCCAATGCTACAGCTTTTAATGAATGTAATGAACGATGCGTATGAACTTG
GAAAAGCAGAAAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

52.542

100

0.525