Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   RGB74_RS11805 Genome accession   NZ_CP134049
Coordinates   2387610..2388281 (-) Length   223 a.a.
NCBI ID   WP_310759501.1    Uniprot ID   -
Organism   Bacillus sp. NEB1478     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2382610..2393281
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RGB74_RS11790 (RGB74_11790) - 2383550..2384044 (-) 495 WP_310759498.1 GNAT family N-acetyltransferase -
  RGB74_RS11795 (RGB74_11795) pepF 2384382..2386199 (-) 1818 WP_310759499.1 oligoendopeptidase F -
  RGB74_RS11800 (RGB74_11800) - 2386276..2387562 (-) 1287 WP_310759500.1 competence protein CoiA family protein -
  RGB74_RS11805 (RGB74_11805) mecA 2387610..2388281 (-) 672 WP_310759501.1 adaptor protein MecA Regulator
  RGB74_RS11810 (RGB74_11810) - 2388604..2389272 (+) 669 WP_310759502.1 TerC family protein -
  RGB74_RS11815 (RGB74_11815) spxA 2389430..2389828 (-) 399 WP_251312756.1 transcriptional regulator SpxA -
  RGB74_RS11820 (RGB74_11820) - 2390108..2390242 (-) 135 WP_310759503.1 hypothetical protein -
  RGB74_RS11825 (RGB74_11825) - 2390280..2390894 (-) 615 WP_310759504.1 GNAT family N-acetyltransferase -
  RGB74_RS11830 (RGB74_11830) - 2391020..2391202 (+) 183 WP_310759505.1 hypothetical protein -
  RGB74_RS11835 (RGB74_11835) - 2391296..2393056 (+) 1761 WP_310759506.1 UbiD family decarboxylase -

Sequence

Protein


Download         Length: 223 a.a.        Molecular weight: 26633.34 Da        Isoelectric Point: 3.8862

>NTDB_id=878379 RGB74_RS11805 WP_310759501.1 2387610..2388281(-) (mecA) [Bacillus sp. NEB1478]
MEIERVNEFTIKFFITYRDIEDRGFDREEIWSDRERGEELFWEMMDEAHQQEQFPLEGPLWIQVQALDKGLEIIVTRAQM
SKDGKKIELPIGDDKLDLPVDQHIEKLLDQQFQVEEEEYDELEESDEDYLSFLFTFNDFEDVILLSHTIDSSSFENSLYH
FEGRYFLYVTFNAEATDKEQDDLLAQLLEYGNDSDLSVYRIQEYGKNIVSENALDHVQEYFKL

Nucleotide


Download         Length: 672 bp        

>NTDB_id=878379 RGB74_RS11805 WP_310759501.1 2387610..2388281(-) (mecA) [Bacillus sp. NEB1478]
ATGGAAATTGAAAGAGTGAATGAGTTCACCATAAAATTTTTTATTACGTATCGTGACATAGAAGATCGAGGATTTGACCG
CGAAGAAATATGGTCTGATCGAGAAAGAGGAGAAGAACTTTTTTGGGAAATGATGGATGAGGCCCATCAGCAAGAACAAT
TTCCACTAGAAGGTCCTCTTTGGATTCAAGTCCAAGCTTTAGATAAAGGACTCGAAATTATCGTAACGCGTGCCCAAATG
TCTAAAGACGGCAAAAAAATTGAACTCCCTATCGGTGATGATAAGCTGGATCTTCCCGTTGATCAGCATATTGAGAAGCT
GCTCGACCAGCAATTTCAAGTTGAAGAAGAAGAATACGATGAATTAGAAGAATCGGATGAGGATTATTTATCGTTCTTGT
TTACGTTTAATGACTTTGAAGATGTTATTTTATTAAGTCACACGATCGATTCTTCGTCATTTGAAAACTCGTTGTATCAT
TTCGAAGGAAGATATTTTCTATATGTGACATTTAATGCAGAAGCTACTGACAAAGAACAAGATGATTTACTGGCACAGCT
TCTCGAATACGGAAACGACTCTGACCTATCTGTTTATCGGATTCAGGAGTATGGAAAAAATATTGTATCCGAAAATGCAT
TAGATCACGTTCAAGAATATTTTAAATTATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.109

99.103

0.556