Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   Q9R16_RS03625 Genome accession   NZ_CP133989
Coordinates   791609..792010 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas sp. 9     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 786609..797010
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q9R16_RS03610 (Q9R16_03610) - 788620..790656 (-) 2037 WP_014038185.1 methyl-accepting chemotaxis protein -
  Q9R16_RS03615 (Q9R16_03615) - 790698..791228 (-) 531 WP_014648092.1 chemotaxis protein CheW -
  Q9R16_RS03620 (Q9R16_03620) - 791228..791590 (-) 363 WP_005410717.1 response regulator -
  Q9R16_RS03625 (Q9R16_03625) pilG 791609..792010 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  Q9R16_RS03630 (Q9R16_03630) gshB 792251..793198 (+) 948 WP_197621715.1 glutathione synthase -
  Q9R16_RS03635 (Q9R16_03635) - 793198..794082 (+) 885 WP_014648095.1 energy transducer TonB -
  Q9R16_RS03640 (Q9R16_03640) tsaB 794740..795453 (-) 714 WP_197621714.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=878190 Q9R16_RS03625 WP_005418455.1 791609..792010(-) (pilG) [Stenotrophomonas sp. 9]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=878190 Q9R16_RS03625 WP_005418455.1 791609..792010(-) (pilG) [Stenotrophomonas sp. 9]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCCAAGATCG
CAGACCAGCAGCCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTGATCATGCTGTCGTCCAAGGATGGTCTGTTCGACAAGGCGCGGGGGCGCAT
CGTCGGCTCGGAGCAATACCTGACCAAGCCTTTCACGCGCGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677