Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | RDV49_RS09575 | Genome accession | NZ_CP133988 |
| Coordinates | 1983513..1985771 (+) | Length | 752 a.a. |
| NCBI ID | WP_037607789.1 | Uniprot ID | A0AAX4AX04 |
| Organism | Streptococcus parasanguinis strain B-1756 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1978513..1990771
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RDV49_RS09550 (RDV49_09550) | - | 1978836..1980290 (-) | 1455 | WP_310744353.1 | glycoside hydrolase family 32 protein | - |
| RDV49_RS09555 (RDV49_09555) | - | 1980300..1981175 (-) | 876 | WP_003005999.1 | NAD(P)H-hydrate dehydratase | - |
| RDV49_RS09560 (RDV49_09560) | - | 1981228..1982001 (-) | 774 | WP_003005996.1 | HAD-IIB family hydrolase | - |
| RDV49_RS09565 (RDV49_09565) | - | 1982015..1982869 (-) | 855 | WP_003005994.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | - |
| RDV49_RS09570 (RDV49_09570) | - | 1983035..1983265 (-) | 231 | WP_003005989.1 | DUF1797 family protein | - |
| RDV49_RS09575 (RDV49_09575) | clpE | 1983513..1985771 (+) | 2259 | WP_037607789.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| RDV49_RS09580 (RDV49_09580) | - | 1986036..1986485 (+) | 450 | WP_003005981.1 | NUDIX hydrolase | - |
| RDV49_RS09585 (RDV49_09585) | - | 1986553..1986855 (+) | 303 | WP_003005978.1 | DUF1827 family protein | - |
| RDV49_RS09590 (RDV49_09590) | ileS | 1986957..1989749 (-) | 2793 | WP_003005974.1 | isoleucine--tRNA ligase | - |
Sequence
Protein
Download Length: 752 a.a. Molecular weight: 83793.97 Da Isoelectric Point: 5.2208
>NTDB_id=878182 RDV49_RS09575 WP_037607789.1 1983513..1985771(+) (clpE) [Streptococcus parasanguinis strain B-1756]
MLCQNCKINESTIHLYTNVNGRQQQVDLCQNCYKIMKTDPNNSFLKGMTQRSQLTGDPFEDFFNNLGNFQSPQEPQTPPT
QSGGSYGGGGYGQNNNRGGGQDPRQARPQKPKGLLEEFGINVTEIARKGDIDPVIGRDEEIIRVIEILNRRTKNNPVLIG
EPGVGKTAVVEGLAQKIVDGDVPHKLQGKEVIRLDVVSLVQGTGIRGQFEERMQKLMDEIRQREDVILFIDEIHEIVGAG
SAGEGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETITILKGIQKKYEDYHHVHYTD
GAIEAAAILSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKAQATREEDFEKAAYFRDQIAKYK
EMQGQHVTDQETPVISEKTIEHIVEQKTNIPVGDLKEKEQSQLINLASDLKAHVIGQDDAVDKIAKAIRRNRVGLGSPNR
PIGSFLFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHSVAKLVGAPPGYVGYDEAGQLTEKVRRNPYSLVLL
DEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKAEANVGFGAAREGRTNSVLGELGNFFSPEFMN
RFDGIIEFQPLSKENLLQIVTLMLDEVNQRLAQNEIHLDVTEKIKEKLVDLGYDPKMGARPLRRTIQDHIEDAITDYYLE
HPSEKQLKAVMTSNGNISIKAVHKTAEKKSEA
MLCQNCKINESTIHLYTNVNGRQQQVDLCQNCYKIMKTDPNNSFLKGMTQRSQLTGDPFEDFFNNLGNFQSPQEPQTPPT
QSGGSYGGGGYGQNNNRGGGQDPRQARPQKPKGLLEEFGINVTEIARKGDIDPVIGRDEEIIRVIEILNRRTKNNPVLIG
EPGVGKTAVVEGLAQKIVDGDVPHKLQGKEVIRLDVVSLVQGTGIRGQFEERMQKLMDEIRQREDVILFIDEIHEIVGAG
SAGEGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETITILKGIQKKYEDYHHVHYTD
GAIEAAAILSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKAQATREEDFEKAAYFRDQIAKYK
EMQGQHVTDQETPVISEKTIEHIVEQKTNIPVGDLKEKEQSQLINLASDLKAHVIGQDDAVDKIAKAIRRNRVGLGSPNR
PIGSFLFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHSVAKLVGAPPGYVGYDEAGQLTEKVRRNPYSLVLL
DEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKAEANVGFGAAREGRTNSVLGELGNFFSPEFMN
RFDGIIEFQPLSKENLLQIVTLMLDEVNQRLAQNEIHLDVTEKIKEKLVDLGYDPKMGARPLRRTIQDHIEDAITDYYLE
HPSEKQLKAVMTSNGNISIKAVHKTAEKKSEA
Nucleotide
Download Length: 2259 bp
>NTDB_id=878182 RDV49_RS09575 WP_037607789.1 1983513..1985771(+) (clpE) [Streptococcus parasanguinis strain B-1756]
ATGCTTTGTCAAAATTGTAAAATAAATGAATCAACCATCCATTTATATACAAATGTAAATGGACGTCAGCAGCAAGTAGA
CCTCTGTCAAAATTGCTATAAAATTATGAAAACAGACCCAAATAACAGCTTCTTGAAAGGCATGACCCAACGGAGCCAAC
TCACTGGAGATCCTTTTGAAGATTTCTTCAATAACCTTGGAAACTTCCAAAGTCCGCAAGAACCTCAAACCCCTCCAACT
CAATCCGGAGGCAGTTATGGAGGTGGCGGCTACGGCCAAAACAATAACCGTGGTGGTGGTCAAGACCCTCGTCAAGCACG
CCCTCAAAAGCCAAAAGGACTGTTAGAAGAGTTCGGCATCAATGTCACAGAAATTGCCCGCAAAGGGGATATTGACCCTG
TCATTGGCCGTGACGAGGAGATTATCCGTGTCATCGAAATCCTCAACCGTCGAACCAAGAACAACCCGGTTCTGATTGGA
GAGCCTGGGGTCGGAAAAACTGCCGTAGTGGAAGGCCTGGCTCAAAAAATCGTCGATGGCGACGTTCCACATAAATTGCA
AGGAAAAGAAGTCATCCGCCTAGACGTCGTCAGCCTCGTTCAGGGCACAGGCATCCGTGGTCAATTCGAAGAACGCATGC
AAAAATTAATGGATGAAATTCGTCAACGCGAAGATGTTATTCTGTTTATCGACGAAATCCATGAAATCGTTGGCGCAGGA
TCAGCTGGTGAGGGCAATATGGACGCTGGAAATATCCTCAAACCAGCCTTAGCGCGAGGAGAACTCCAATTAGTTGGGGC
TACTACCCTCAATGAATACCGTATCATTGAAAAAGATGCGGCCTTGGAACGTCGGATGCAGCCCGTTAAGGTCGATGAAC
CAACGGTTGAAGAAACCATCACCATCCTCAAGGGCATCCAGAAAAAATACGAAGACTACCACCACGTCCACTATACAGAC
GGGGCCATCGAAGCGGCAGCTATTCTTTCAAACCGCTATATCCAAGATCGCTTCCTGCCAGACAAGGCCATTGATTTGTT
GGATGAAGCGGGGTCTAAGATGAACCTGACCCTAAACTTTGTGGATCCAAAAGTGATCGACCAACGCTTGATTGAAGCGG
AAAACCTCAAAGCCCAAGCAACACGTGAAGAAGACTTTGAAAAAGCAGCCTACTTCCGTGACCAAATCGCGAAATACAAG
GAAATGCAAGGTCAACATGTCACCGATCAAGAGACCCCTGTCATCAGCGAAAAAACGATTGAACACATCGTTGAACAAAA
GACCAATATTCCTGTTGGTGATTTGAAAGAAAAAGAACAGTCTCAATTGATCAATCTGGCTTCTGATTTGAAAGCTCATG
TGATTGGTCAAGACGATGCAGTAGATAAAATCGCGAAAGCCATTCGACGCAATCGTGTCGGCCTAGGATCTCCTAACCGT
CCGATCGGAAGCTTCCTCTTTGTCGGACCAACCGGTGTCGGAAAGACCGAATTGTCTAAACAATTGGCGATCGAGCTCTT
TGGCTCTGCAGACAATATGATCCGCTTTGACATGAGCGAATACATGGAAAAACATAGCGTAGCGAAACTAGTCGGAGCTC
CTCCAGGCTATGTTGGCTACGATGAAGCTGGACAACTAACGGAAAAGGTCCGTCGCAATCCTTACTCCCTCGTGTTATTG
GATGAAGTGGAAAAAGCCCATCCAGATGTCATGCACATGTTCTTGCAAGTCTTAGATGATGGCCGTTTGACAGATGGTCA
AGGCCGTACCGTTAGCTTCAAAGATACCATTATCATCATGACCTCTAATGCTGGAACTGGCAAAGCTGAGGCCAATGTTG
GTTTTGGAGCTGCTCGCGAAGGTCGAACCAACTCTGTACTTGGAGAACTCGGGAACTTCTTTAGCCCTGAATTCATGAAC
CGTTTTGATGGCATCATTGAATTCCAACCTCTATCAAAAGAAAACCTTCTCCAAATCGTTACCCTCATGCTCGATGAAGT
CAATCAACGTCTCGCACAAAATGAGATTCATCTGGATGTGACAGAGAAGATCAAAGAAAAATTGGTCGATCTGGGATACG
ATCCAAAAATGGGGGCCCGCCCACTCCGTCGTACCATCCAAGACCATATCGAAGATGCCATTACCGATTATTACCTGGAA
CATCCAAGTGAGAAACAACTCAAAGCAGTCATGACCAGCAATGGGAATATTAGCATCAAAGCAGTTCACAAGACGGCTGA
AAAGAAGTCAGAAGCATAA
ATGCTTTGTCAAAATTGTAAAATAAATGAATCAACCATCCATTTATATACAAATGTAAATGGACGTCAGCAGCAAGTAGA
CCTCTGTCAAAATTGCTATAAAATTATGAAAACAGACCCAAATAACAGCTTCTTGAAAGGCATGACCCAACGGAGCCAAC
TCACTGGAGATCCTTTTGAAGATTTCTTCAATAACCTTGGAAACTTCCAAAGTCCGCAAGAACCTCAAACCCCTCCAACT
CAATCCGGAGGCAGTTATGGAGGTGGCGGCTACGGCCAAAACAATAACCGTGGTGGTGGTCAAGACCCTCGTCAAGCACG
CCCTCAAAAGCCAAAAGGACTGTTAGAAGAGTTCGGCATCAATGTCACAGAAATTGCCCGCAAAGGGGATATTGACCCTG
TCATTGGCCGTGACGAGGAGATTATCCGTGTCATCGAAATCCTCAACCGTCGAACCAAGAACAACCCGGTTCTGATTGGA
GAGCCTGGGGTCGGAAAAACTGCCGTAGTGGAAGGCCTGGCTCAAAAAATCGTCGATGGCGACGTTCCACATAAATTGCA
AGGAAAAGAAGTCATCCGCCTAGACGTCGTCAGCCTCGTTCAGGGCACAGGCATCCGTGGTCAATTCGAAGAACGCATGC
AAAAATTAATGGATGAAATTCGTCAACGCGAAGATGTTATTCTGTTTATCGACGAAATCCATGAAATCGTTGGCGCAGGA
TCAGCTGGTGAGGGCAATATGGACGCTGGAAATATCCTCAAACCAGCCTTAGCGCGAGGAGAACTCCAATTAGTTGGGGC
TACTACCCTCAATGAATACCGTATCATTGAAAAAGATGCGGCCTTGGAACGTCGGATGCAGCCCGTTAAGGTCGATGAAC
CAACGGTTGAAGAAACCATCACCATCCTCAAGGGCATCCAGAAAAAATACGAAGACTACCACCACGTCCACTATACAGAC
GGGGCCATCGAAGCGGCAGCTATTCTTTCAAACCGCTATATCCAAGATCGCTTCCTGCCAGACAAGGCCATTGATTTGTT
GGATGAAGCGGGGTCTAAGATGAACCTGACCCTAAACTTTGTGGATCCAAAAGTGATCGACCAACGCTTGATTGAAGCGG
AAAACCTCAAAGCCCAAGCAACACGTGAAGAAGACTTTGAAAAAGCAGCCTACTTCCGTGACCAAATCGCGAAATACAAG
GAAATGCAAGGTCAACATGTCACCGATCAAGAGACCCCTGTCATCAGCGAAAAAACGATTGAACACATCGTTGAACAAAA
GACCAATATTCCTGTTGGTGATTTGAAAGAAAAAGAACAGTCTCAATTGATCAATCTGGCTTCTGATTTGAAAGCTCATG
TGATTGGTCAAGACGATGCAGTAGATAAAATCGCGAAAGCCATTCGACGCAATCGTGTCGGCCTAGGATCTCCTAACCGT
CCGATCGGAAGCTTCCTCTTTGTCGGACCAACCGGTGTCGGAAAGACCGAATTGTCTAAACAATTGGCGATCGAGCTCTT
TGGCTCTGCAGACAATATGATCCGCTTTGACATGAGCGAATACATGGAAAAACATAGCGTAGCGAAACTAGTCGGAGCTC
CTCCAGGCTATGTTGGCTACGATGAAGCTGGACAACTAACGGAAAAGGTCCGTCGCAATCCTTACTCCCTCGTGTTATTG
GATGAAGTGGAAAAAGCCCATCCAGATGTCATGCACATGTTCTTGCAAGTCTTAGATGATGGCCGTTTGACAGATGGTCA
AGGCCGTACCGTTAGCTTCAAAGATACCATTATCATCATGACCTCTAATGCTGGAACTGGCAAAGCTGAGGCCAATGTTG
GTTTTGGAGCTGCTCGCGAAGGTCGAACCAACTCTGTACTTGGAGAACTCGGGAACTTCTTTAGCCCTGAATTCATGAAC
CGTTTTGATGGCATCATTGAATTCCAACCTCTATCAAAAGAAAACCTTCTCCAAATCGTTACCCTCATGCTCGATGAAGT
CAATCAACGTCTCGCACAAAATGAGATTCATCTGGATGTGACAGAGAAGATCAAAGAAAAATTGGTCGATCTGGGATACG
ATCCAAAAATGGGGGCCCGCCCACTCCGTCGTACCATCCAAGACCATATCGAAGATGCCATTACCGATTATTACCTGGAA
CATCCAAGTGAGAAACAACTCAAAGCAGTCATGACCAGCAATGGGAATATTAGCATCAAAGCAGTTCACAAGACGGCTGA
AAAGAAGTCAGAAGCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus pneumoniae Rx1 |
86.968 |
100 |
0.87 |
| clpE | Streptococcus pneumoniae D39 |
86.968 |
100 |
0.87 |
| clpE | Streptococcus pneumoniae R6 |
86.968 |
100 |
0.87 |
| clpE | Streptococcus pneumoniae TIGR4 |
86.968 |
100 |
0.87 |
| clpE | Streptococcus mutans UA159 |
83.845 |
99.601 |
0.835 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
75.561 |
100 |
0.761 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
50.425 |
93.883 |
0.473 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.699 |
86.702 |
0.414 |
| clpC | Streptococcus pneumoniae Rx1 |
47.84 |
83.112 |
0.398 |
| clpC | Streptococcus pneumoniae D39 |
47.84 |
83.112 |
0.398 |
| clpC | Streptococcus pneumoniae TIGR4 |
47.68 |
83.112 |
0.396 |
| clpC | Streptococcus mutans UA159 |
46.88 |
83.112 |
0.39 |
| clpC | Streptococcus thermophilus LMD-9 |
47.03 |
82.846 |
0.39 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.785 |
82.713 |
0.387 |