Detailed information NTG0878095

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QQE96_RS07465
• Genome accession: NZ_CP133987
• Coordinates: 468361..469368 (+)
• Length: 335 a.a.
• NCBI ID: WP_168520782.1
• Uniprot ID: -
• Organism: Vibrio aestuarianus subsp. francensis strain LC_Sco
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 463361..474368

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QQE96_RS07445 (QQE96_07525)	metJ	463416..463739 (+)	324	WP_168520775.1	met regulon transcriptional regulator MetJ	-
QQE96_RS07450 (QQE96_07530)	-	463896..465173 (-)	1278	WP_168520777.1	malic enzyme-like NAD(P)-binding protein	-
QQE96_RS07455 (QQE96_07535)	rpmE	465390..465608 (-)	219	WP_053309611.1	50S ribosomal protein L31	-
QQE96_RS07460 (QQE96_07540)	priA	465876..468077 (+)	2202	WP_168520779.1	primosomal protein N'	-
QQE96_RS07465 (QQE96_07545)	cytR	468361..469368 (+)	1008	WP_168520782.1	DNA-binding transcriptional regulator CytR	Regulator
QQE96_RS07470 (QQE96_07550)	-	469470..470012 (+)	543	WP_168520784.1	SPOR domain-containing protein	-
QQE96_RS07475 (QQE96_07555)	hslV	470136..470702 (+)	567	WP_168520786.1	ATP-dependent protease subunit HslV	-
QQE96_RS07480 (QQE96_07560)	hslU	470740..472071 (+)	1332	WP_053309606.1	HslU--HslV peptidase ATPase subunit	-
QQE96_RS07485 (QQE96_07565)	-	472182..473099 (+)	918	WP_053309605.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QQE96_RS07490 (QQE96_07570)	rraA	473176..473694 (+)	519	WP_168520788.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36714.20 Da
• Isoelectric Point: 6.2462

>NTDB_id=878095 QQE96_RS07465 WP_168520782.1 468361..469368(+) (cytR) [Vibrio aestuarianus subsp. francensis strain LC_Sco]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRERSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRVAQISGPEAATLCQFRHQGYQQALRRAGISLNPAYCTYGDFTFEAGAKAVRQLLALPEPPTA
IFSHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFASYCDPPLTTISQPRYEIGRQAMLMMLELLRGHEVGAGSRLLE
TSLVVRESAAPPRLV

Nucleotide

• Length: 1008 bp

>NTDB_id=878095 QQE96_RS07465 WP_168520782.1 468361..469368(+) (cytR) [Vibrio aestuarianus subsp. francensis strain LC_Sco]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCCGGTGTATCAACAGCCACGGTATCAAGGGCATTGATGAACCCAGAAAA
AGTGTCATCCTCAACGCGTAAACGTGTAGAAGATGCCGTTTTGGAGGCTGGTTATTCACCAAATTCTCTCGCTCGAAACT
TACGTCGAAATGAATCAAAAACTATTGTGGCGATTGTCCCTGATATTTGTGACCCTTATTTCACAGAGATCATTCGTGGC
ATTGAAGACGCAGCTATGGAGCATGGTTACCTTGTTTTATTGGGTGACAGTGGCCAGCAGAAAAAGCGCGAGCGATCTTT
GGTTAACTTAGTTTTCACCAAACAAGCGGATGGCATGCTACTACTTGGAACGGATCTTCCTTTTGATGTCAGCAAACCCG
AACAGAAAAATTTGCCACCGATGGTGATGGCGTGTGAATTTGCCCCGGAATTAGAATTACCGACAGTACACATCGATAAC
CTCACCTCAGCATTTGAAGCGGTGAATTACTTAACTCAGTTAGGGCATAAGCGGGTTGCACAGATTTCTGGACCGGAAGC
GGCCACATTGTGCCAATTTCGGCATCAAGGTTATCAGCAGGCACTTCGTCGCGCAGGAATAAGCTTGAATCCAGCATATT
GTACTTATGGTGACTTTACTTTTGAGGCAGGCGCTAAAGCGGTAAGACAGTTACTGGCTTTACCTGAGCCTCCTACTGCC
ATTTTTAGCCATAATGACACAATGGCGATAGGTGCCATTCAAGAAGCTAAGAGGCTAGGGTTGCGTGTACCACAAGACCT
CTCTGTTGTTGGTTTCGATGATATTCAATTTGCGAGCTATTGTGATCCACCGCTGACAACTATCTCCCAGCCTCGTTATG
AAATTGGCCGTCAAGCGATGTTGATGATGCTCGAGCTGCTGCGTGGTCATGAAGTTGGTGCAGGTTCTCGATTGCTAGAA
ACGAGCCTAGTGGTTCGGGAAAGTGCCGCTCCTCCTCGTTTAGTGTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	94.277	99.104	0.934
cytR	Vibrio parahaemolyticus RIMD 2210633	90.09	99.403	0.896