Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   WOC44_RS11940 Genome accession   NZ_CP150737
Coordinates   2379115..2379915 (-) Length   266 a.a.
NCBI ID   WP_000088648.1    Uniprot ID   A0A0H2XG71
Organism   Staphylococcus aureus strain TUM22723     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2374115..2384915
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WOC44_RS11925 (WOC44_11925) - 2374140..2375396 (-) 1257 WP_341270896.1 DUF3578 domain-containing protein -
  WOC44_RS11930 (WOC44_11930) rlmH 2375718..2376197 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  WOC44_RS11935 (WOC44_11935) adsA 2376565..2378887 (-) 2323 Protein_2310 LPXTG-anchored adenosine synthase AdsA -
  WOC44_RS11940 (WOC44_11940) vicX 2379115..2379915 (-) 801 WP_000088648.1 MBL fold metallo-hydrolase Regulator
  WOC44_RS11945 (WOC44_11945) yycI 2380305..2381093 (-) 789 WP_129364397.1 two-component system regulatory protein YycI -
  WOC44_RS11950 (WOC44_11950) yycH 2381094..2382428 (-) 1335 WP_001060131.1 two-component system activity regulator YycH -
  WOC44_RS11955 (WOC44_11955) walK 2382421..2384247 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30327.55 Da        Isoelectric Point: 6.3392

>NTDB_id=877925 WOC44_RS11940 WP_000088648.1 2379115..2379915(-) (vicX) [Staphylococcus aureus strain TUM22723]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAAHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=877925 WOC44_RS11940 WP_000088648.1 2379115..2379915(-) (vicX) [Staphylococcus aureus strain TUM22723]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGAAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGCTCATGCAATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGACAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XG71

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.416

96.617

0.477