Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   RIM74_RS03310 Genome accession   NZ_CP133955
Coordinates   638437..639438 (+) Length   333 a.a.
NCBI ID   WP_012516008.1    Uniprot ID   A1E373
Organism   Streptococcus equi subsp. equi strain HTP133     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 633437..644438
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RIM74_RS03290 (RIM74_03290) - 634332..635183 (-) 852 WP_317583007.1 helix-turn-helix domain-containing protein -
  RIM74_RS03295 (RIM74_03295) - 635263..635397 (+) 135 WP_264947510.1 hypothetical protein -
  RIM74_RS03300 (RIM74_03300) - 635421..637004 (+) 1584 WP_317583008.1 ABC transporter ATP-binding protein -
  RIM74_RS03305 (RIM74_03305) - 637178..638263 (-) 1086 WP_012679860.1 Xaa-Pro peptidase family protein -
  RIM74_RS03310 (RIM74_03310) ccpA 638437..639438 (+) 1002 WP_012516008.1 catabolite control protein A Regulator
  RIM74_RS03315 (RIM74_03315) - 639508..640983 (+) 1476 WP_012679859.1 alpha-amylase -
  RIM74_RS03320 (RIM74_03320) - 641279..642277 (+) 999 WP_012679858.1 glycosyltransferase family 4 protein -
  RIM74_RS03325 (RIM74_03325) - 642279..643613 (+) 1335 WP_012679857.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36631.75 Da        Isoelectric Point: 5.7642

>NTDB_id=877859 RIM74_RS03310 WP_012516008.1 638437..639438(+) (ccpA) [Streptococcus equi subsp. equi strain HTP133]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTDKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVADVVDILAKDHQSIAFVSGPLIDDINGKVRLAGYKDGLKKNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=877859 RIM74_RS03310 WP_012516008.1 638437..639438(+) (ccpA) [Streptococcus equi subsp. equi strain HTP133]
ATGAATACAGATGATACAATCACGATTTATGATGTTGCTCGCGAAGCGGGAGTTTCAATGGCGACAGTTAGTCGAGTTGT
AAATGGTAACAAAAATGTAAAGGAAAATACCCGCAAAAAGGTCTTAGAGGTTATTGATCGTCTCGATTATCGTCCAAATG
CTGTTGCTCGTGGTCTTGCAAGTAAAAAGACAACAACAGTCGGTGTTGTGATTCCTAATATTGCAAATAGCTATTTTTCT
ATTCTGGCAAAGGGAATTGATGATATTGCTGCTATGTACAAGTACAATATTGTTCTTGCTTCAAGTGATGAGGACGATGA
TAAAGAGGTCAATGTTGTGAATACCCTCTTTGCAAAGCAGGTCGATGGCATTATTTTCATGGGACATCACTTGACTGACA
AGATTCGGGCAGAGTTTTCTCGTTCGCGTACGCCAATCGTTCTGGCAGGAACGGTTGATCTGGATCATCAGCTGCCAAGT
GTTAACATTGATTATAAGGCGGCTGTTGCTGATGTGGTGGATATTTTAGCTAAAGACCACCAAAGCATTGCCTTTGTTTC
AGGGCCGCTCATTGATGATATCAACGGAAAGGTGCGTTTAGCTGGCTACAAGGACGGACTCAAGAAGAACAAGCTTGACT
TTAAAGAGGGTCTGGTGTTTGAGGCCAACTATTCTTATAAGGAAGGCTTTGAGCTGGCTCAGCGTGTGATCAATTCCGGA
GCGACAGCTGCCTATGTTGCAGAGGACGAGCTGGCAGCAGGCCTTTTGAATGGTCTTTTTGAAGCTGGTAAGCGTGTTCC
AGAAGACTTTGAGATTATCACAAGCAATGATTCTCCAGTCGTTCAGTACACACGTCCAAATTTGAGCTCTATCAGCCAGC
CGGTCTATGACTTGGGGGCTGTTAGCATGCGTATGCTCACTAAGATCATGAATAAGGAAGAATTAGAAGAAAAAGAAATT
TTATTGAACCATGGCATTAAAAAGCGTGGGACAACAAAATAG

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A1E373

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781
  ccpA Streptococcus pneumoniae D39

76.877

100

0.769
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

54.985

99.399

0.547