Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   RIM63_RS02195 Genome accession   NZ_CP133952
Coordinates   443897..444622 (+) Length   241 a.a.
NCBI ID   WP_043038646.1    Uniprot ID   A0A380JND7
Organism   Streptococcus equi subsp. zooepidemicus strain HT321     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 438897..449622
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RIM63_RS02165 (RIM63_02165) tsaE 439451..439894 (+) 444 WP_021320420.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  RIM63_RS02170 (RIM63_02170) - 439887..440414 (+) 528 WP_317584623.1 GNAT family N-acetyltransferase -
  RIM63_RS02175 (RIM63_02175) brpA 440415..441677 (+) 1263 WP_282707903.1 biofilm formation/cell division transcriptional regulator BrpA -
  RIM63_RS02180 (RIM63_02180) - 441841..442143 (-) 303 WP_014622379.1 hypothetical protein -
  RIM63_RS02185 (RIM63_02185) - 442140..442559 (-) 420 WP_012515079.1 HIT family protein -
  RIM63_RS02190 (RIM63_02190) - 443127..443357 (-) 231 WP_317584628.1 hypothetical protein -
  RIM63_RS02195 (RIM63_02195) pptA 443897..444622 (+) 726 WP_043038646.1 ABC transporter ATP-binding protein Regulator
  RIM63_RS02200 (RIM63_02200) - 444626..445660 (+) 1035 WP_317584629.1 ABC transporter permease -
  RIM63_RS02205 (RIM63_02205) ccrZ 445723..446514 (+) 792 WP_317584631.1 cell cycle regulator CcrZ -
  RIM63_RS02210 (RIM63_02210) trmB 446514..447149 (+) 636 WP_115250646.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  RIM63_RS02220 (RIM63_02220) - 447765..448280 (-) 516 WP_021320424.1 hypothetical protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26636.91 Da        Isoelectric Point: 4.7723

>NTDB_id=877752 RIM63_RS02195 WP_043038646.1 443897..444622(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain HT321]
MLNIENVTGGYLNIPVLKDISFSVANGELVGLIGLNGAGKSTTINEIIGFLKPYKGRISIDGLTLEEHEADYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDLELAHRRAEPFLELFRLTDKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIKALEVEKAKGKSILMSTHVLDSAEKMCDRFVILHQGQVRAQGTLADLQAVFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=877752 RIM63_RS02195 WP_043038646.1 443897..444622(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain HT321]
ATGCTAAACATTGAGAATGTCACTGGAGGCTATCTTAATATTCCAGTTTTGAAGGATATTAGCTTTTCTGTTGCAAATGG
AGAGCTGGTAGGGCTTATTGGTCTAAATGGTGCTGGTAAGTCAACAACGATTAATGAAATTATTGGGTTTTTAAAGCCAT
ATAAAGGAAGGATTTCCATTGATGGCTTAACCTTGGAAGAGCATGAAGCTGATTATCGTAAGAAAATTGGCTTTATTCCA
GAAACACCAAGCTTATATGAGGAGCTGACCTTAGCAGAGCATATCAATACGGTGGCTATGGCCTATGATATTGATTTGGA
GCTGGCTCATCGGCGAGCTGAGCCCTTCTTAGAGCTGTTTCGCTTGACGGATAAGCTGGATTGGTTTCCGGTGCATTTTT
CTAAGGGAATGAAGCAAAAGGTTATGATTATTTGTGCTTTTGTCATTGATCCTAGTCTTTTTATTCTTGATGAGCCCTTT
TTGGGACTGGATCCTCTAGCTATTTCGGATTTGATCAAGGCTCTAGAGGTTGAAAAGGCAAAGGGCAAGTCAATTCTAAT
GAGTACCCATGTGCTGGATTCGGCAGAAAAAATGTGTGACCGTTTTGTGATATTGCATCAGGGGCAGGTGCGTGCGCAAG
GGACTCTGGCTGATTTGCAGGCAGTCTTTGGAGATGCTTCAGCTAGTCTTAATGACATTTACCTAGCACTGACAAAAGAG
GGTTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380JND7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.895

99.17

0.743
  pptA Streptococcus thermophilus LMD-9

74.059

99.17

0.734