Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   RIM64_RS01290 Genome accession   NZ_CP133951
Coordinates   249789..251048 (+) Length   419 a.a.
NCBI ID   WP_317583201.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain JMC111     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 244789..256048
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RIM64_RS01265 (RIM64_01265) dexB 245467..247086 (+) 1620 WP_165619398.1 glucan 1,6-alpha-glucosidase DexB -
  RIM64_RS01270 (RIM64_01270) traF 247195..247557 (+) 363 WP_151374869.1 conjugal transfer protein TraF -
  RIM64_RS01275 (RIM64_01275) yajC 247671..248030 (+) 360 WP_015898577.1 preprotein translocase subunit YajC -
  RIM64_RS01280 (RIM64_01280) - 248204..248953 (+) 750 WP_111710847.1 isoprenyl transferase -
  RIM64_RS01285 (RIM64_01285) - 248963..249757 (+) 795 WP_138119827.1 phosphatidate cytidylyltransferase -
  RIM64_RS01290 (RIM64_01290) eeP 249789..251048 (+) 1260 WP_317583201.1 RIP metalloprotease RseP Regulator
  RIM64_RS01295 (RIM64_01295) - 251341..253197 (+) 1857 WP_138119823.1 proline--tRNA ligase -
  RIM64_RS01300 (RIM64_01300) - 253249..253806 (+) 558 WP_015898573.1 nucleotidyltransferase family protein -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45861.41 Da        Isoelectric Point: 6.1699

>NTDB_id=877685 RIM64_RS01290 WP_317583201.1 249789..251048(+) (eeP) [Streptococcus equi subsp. zooepidemicus strain JMC111]
MLGIITFIIIFGILVLVHEFGHFYFAKRSGILVREFAIGMGPKLFSHVDQQGTLYTIRLLPLGGYVRMAGWGDDTTEIKT
GTPASLTLNDQGLVKRINLSQSKLDPTSLPMNVTAYDLEDKLTITGLVLDEIKTYSVDHDATIVEEDGTEIRIAPLDVQY
QNASIGGRLITNFAGPMNNFILGIVVFILFAFVQGGVADYHSNHIRVVENGAAAKAGIRDNDQILEINHQKINDWYELTQ
AVTDSAADVKAKGKLEITYQTGYQVKTIALKPEKKGDQYLIGVQYPLKTSLTDKLIGGFEMAGNGALVIVTALKSLITSF
SLDKLGGPVAMYQMSNQAAKNGLESVLSLMAMLSINLGIFNLIPIPALDGGKILMNVIEALRRKPLKQETETYITLAGVA
IMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=877685 RIM64_RS01290 WP_317583201.1 249789..251048(+) (eeP) [Streptococcus equi subsp. zooepidemicus strain JMC111]
ATGTTAGGAATAATTACCTTTATTATTATTTTTGGTATTCTTGTGCTTGTCCATGAGTTTGGCCATTTCTATTTTGCTAA
ACGATCTGGTATTTTAGTCAGAGAGTTTGCTATTGGCATGGGACCAAAACTCTTTTCGCATGTTGATCAGCAAGGAACGC
TTTACACGATCCGGCTATTACCGCTTGGTGGCTATGTGCGAATGGCAGGCTGGGGTGATGACACGACTGAGATAAAAACA
GGAACACCTGCTAGCTTGACGCTTAATGATCAAGGCTTGGTCAAGCGGATTAACCTGTCTCAGAGCAAGCTTGATCCAAC
CAGCCTGCCTATGAATGTGACTGCTTATGACTTAGAAGATAAGTTGACGATTACAGGGCTGGTTCTTGATGAGATCAAGA
CCTATTCGGTAGACCATGACGCGACCATTGTCGAGGAGGACGGTACAGAGATCCGGATTGCGCCGCTTGATGTTCAGTAT
CAAAACGCAAGCATTGGCGGTCGTTTGATCACCAATTTTGCAGGACCTATGAATAATTTTATTCTAGGTATTGTTGTCTT
TATTTTGTTTGCCTTTGTTCAAGGTGGTGTGGCTGATTATCATAGCAACCATATTCGTGTGGTGGAAAATGGCGCAGCAG
CCAAGGCTGGTATTAGAGACAATGATCAGATTTTAGAGATTAATCATCAAAAGATTAATGACTGGTATGAGTTGACGCAG
GCCGTTACTGATTCAGCAGCAGATGTTAAGGCTAAGGGCAAGCTAGAGATTACCTATCAGACAGGTTATCAGGTTAAGAC
TATAGCACTGAAGCCTGAAAAAAAAGGCGATCAGTACCTTATTGGTGTCCAGTACCCACTAAAAACAAGTCTGACAGACA
AGCTAATAGGTGGCTTTGAGATGGCTGGTAATGGTGCTCTAGTGATTGTCACTGCTCTAAAGAGTTTGATTACCTCCTTT
AGTCTGGATAAATTAGGTGGGCCGGTTGCCATGTATCAGATGTCCAATCAGGCAGCTAAGAATGGCTTAGAGTCTGTCTT
GTCCTTGATGGCAATGCTCTCTATCAATTTAGGGATTTTTAATTTGATTCCGATTCCCGCACTAGATGGTGGTAAGATCC
TGATGAATGTGATTGAAGCACTTCGTCGTAAGCCATTAAAGCAAGAGACAGAGACTTATATTACCCTTGCAGGTGTTGCG
ATTATGGTTGTGCTCATGATTGCAGTGACCTGGAACGATATTATGCGAGCCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)

(206-237)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

68.095

100

0.683

  eeP Streptococcus thermophilus LMD-9

67.857

100

0.68