Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   RIM62_RS01290 Genome accession   NZ_CP133950
Coordinates   249689..250948 (+) Length   419 a.a.
NCBI ID   WP_317583201.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain ZHZ211     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 244689..255948
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RIM62_RS01265 (RIM62_01265) dexB 245367..246986 (+) 1620 WP_165619398.1 glucan 1,6-alpha-glucosidase DexB -
  RIM62_RS01270 (RIM62_01270) traF 247095..247457 (+) 363 WP_151374869.1 conjugal transfer protein TraF -
  RIM62_RS01275 (RIM62_01275) yajC 247571..247930 (+) 360 WP_015898577.1 preprotein translocase subunit YajC -
  RIM62_RS01280 (RIM62_01280) - 248104..248853 (+) 750 WP_111710847.1 isoprenyl transferase -
  RIM62_RS01285 (RIM62_01285) - 248863..249657 (+) 795 WP_138119827.1 phosphatidate cytidylyltransferase -
  RIM62_RS01290 (RIM62_01290) eeP 249689..250948 (+) 1260 WP_317583201.1 RIP metalloprotease RseP Regulator
  RIM62_RS01295 (RIM62_01295) - 251241..253097 (+) 1857 WP_138119823.1 proline--tRNA ligase -
  RIM62_RS01300 (RIM62_01300) - 253149..253706 (+) 558 WP_015898573.1 nucleotidyltransferase family protein -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45861.41 Da        Isoelectric Point: 6.1699

>NTDB_id=877623 RIM62_RS01290 WP_317583201.1 249689..250948(+) (eeP) [Streptococcus equi subsp. zooepidemicus strain ZHZ211]
MLGIITFIIIFGILVLVHEFGHFYFAKRSGILVREFAIGMGPKLFSHVDQQGTLYTIRLLPLGGYVRMAGWGDDTTEIKT
GTPASLTLNDQGLVKRINLSQSKLDPTSLPMNVTAYDLEDKLTITGLVLDEIKTYSVDHDATIVEEDGTEIRIAPLDVQY
QNASIGGRLITNFAGPMNNFILGIVVFILFAFVQGGVADYHSNHIRVVENGAAAKAGIRDNDQILEINHQKINDWYELTQ
AVTDSAADVKAKGKLEITYQTGYQVKTIALKPEKKGDQYLIGVQYPLKTSLTDKLIGGFEMAGNGALVIVTALKSLITSF
SLDKLGGPVAMYQMSNQAAKNGLESVLSLMAMLSINLGIFNLIPIPALDGGKILMNVIEALRRKPLKQETETYITLAGVA
IMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=877623 RIM62_RS01290 WP_317583201.1 249689..250948(+) (eeP) [Streptococcus equi subsp. zooepidemicus strain ZHZ211]
ATGTTAGGAATAATTACCTTTATTATTATTTTTGGTATTCTTGTGCTTGTCCATGAGTTTGGCCATTTCTATTTTGCTAA
ACGATCTGGTATTTTAGTCAGAGAGTTTGCTATTGGCATGGGACCAAAACTCTTTTCGCATGTTGATCAGCAAGGAACGC
TTTACACGATCCGGCTATTACCGCTTGGTGGCTATGTGCGAATGGCAGGCTGGGGTGATGACACGACTGAGATAAAAACA
GGAACACCTGCTAGCTTGACGCTTAATGATCAAGGCTTGGTCAAGCGGATTAACCTGTCTCAGAGCAAGCTTGATCCAAC
CAGCCTGCCTATGAATGTGACTGCTTATGACTTAGAAGATAAGTTGACGATTACAGGGCTGGTTCTTGATGAGATCAAGA
CCTATTCGGTAGACCATGACGCGACCATTGTCGAGGAGGACGGTACAGAGATCCGGATTGCGCCGCTTGATGTTCAGTAT
CAAAACGCAAGCATTGGCGGTCGTTTGATCACCAATTTTGCAGGACCTATGAATAATTTTATTCTAGGTATTGTTGTCTT
TATTTTGTTTGCCTTTGTTCAAGGTGGTGTGGCTGATTATCATAGCAACCATATTCGTGTGGTGGAAAATGGCGCAGCAG
CCAAGGCTGGTATTAGAGACAATGATCAGATTTTAGAGATTAATCATCAAAAGATTAATGACTGGTATGAGTTGACGCAG
GCCGTTACTGATTCAGCAGCAGATGTTAAGGCTAAGGGCAAGCTAGAGATTACCTATCAGACAGGTTATCAGGTTAAGAC
TATAGCACTGAAGCCTGAAAAAAAAGGCGATCAGTACCTTATTGGTGTCCAGTACCCACTAAAAACAAGTCTGACAGACA
AGCTAATAGGTGGCTTTGAGATGGCTGGTAATGGTGCTCTAGTGATTGTCACTGCTCTAAAGAGTTTGATTACCTCCTTT
AGTCTGGATAAATTAGGTGGGCCGGTTGCCATGTATCAGATGTCCAATCAGGCAGCTAAGAATGGCTTAGAGTCTGTCTT
GTCCTTGATGGCAATGCTCTCTATCAATTTAGGGATTTTTAATTTGATTCCGATTCCCGCACTAGATGGTGGTAAGATCC
TGATGAATGTGATTGAAGCACTTCGTCGTAAGCCATTAAAGCAAGAGACAGAGACTTATATTACCCTTGCAGGTGTTGCG
ATTATGGTTGTGCTCATGATTGCAGTGACCTGGAACGATATTATGCGAGCCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)

(206-237)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

68.095

100

0.683

  eeP Streptococcus thermophilus LMD-9

67.857

100

0.68