Detailed information NTG0087752

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABJ48_RS13200
• Genome accession: NZ_AP027595
• Coordinates: 2710790..2711815 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain LR-64-2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2705790..2716815

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ48_RS13180 (VEE33_24880)	metJ	2706851..2707168 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AABJ48_RS13185 (VEE33_24890)	yiiX	2707352..2707960 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AABJ48_RS13190 (VEE33_24900)	rpmE	2708021..2708233 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AABJ48_RS13195 (VEE33_24910)	priA	2708436..2710634 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
AABJ48_RS13200 (VEE33_24920)	cytR	2710790..2711815 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AABJ48_RS13205 (VEE33_24930)	ftsN	2711907..2712866 (+)	960	WP_000068828.1	cell division protein FtsN	-
AABJ48_RS13210 (VEE33_24940)	hslV	2712959..2713489 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABJ48_RS13215 (VEE33_24950)	hslU	2713499..2714830 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AABJ48_RS13220 (VEE33_24960)	menA	2714897..2715823 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABJ48_RS13225 (VEE33_24970)	rraA	2715916..2716401 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABJ48_RS13230 (VEE33_24980)	zapB	2716486..2716731 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=87752 AABJ48_RS13200 WP_000644904.1 2710790..2711815(+) (cytR) [Escherichia coli strain LR-64-2]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=87752 AABJ48_RS13200 WP_000644904.1 2710790..2711815(+) (cytR) [Escherichia coli strain LR-64-2]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628