Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   WOC55_RS12460 Genome accession   NZ_CP150727
Coordinates   2489828..2490628 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain TUM22750     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2484828..2495628
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WOC55_RS12445 (WOC55_12445) walK 2485497..2487323 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  WOC55_RS12450 (WOC55_12450) yycH 2487316..2488650 (+) 1335 WP_001060150.1 two-component system activity regulator YycH -
  WOC55_RS12455 (WOC55_12455) yycI 2488651..2489439 (+) 789 WP_001104167.1 two-component system regulatory protein YycI -
  WOC55_RS12460 (WOC55_12460) vicX 2489828..2490628 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  WOC55_RS12465 (WOC55_12465) adsA 2490856..2493174 (+) 2319 WP_000645781.1 LPXTG-anchored adenosine synthase AdsA -
  WOC55_RS12470 (WOC55_12470) rlmH 2493542..2494021 (+) 480 WP_000704777.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  WOC55_RS12475 (WOC55_12475) - 2494343..2495599 (+) 1257 WP_000566670.1 DUF3578 domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=877494 WOC55_RS12460 WP_000088649.1 2489828..2490628(+) (vicX) [Staphylococcus aureus strain TUM22750]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=877494 WOC55_RS12460 WP_000088649.1 2489828..2490628(+) (vicX) [Staphylococcus aureus strain TUM22750]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGACCATATTAAAGGTTTAGGTGTTTTAGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAAGCTATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGATATGTGTCGGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGACATGTATCTAATGAGGATGCGGGCCATGCGATGACGGATGTGATTACAGGCAACACGA
AACGTATTTACCTATCACATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474