Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   WHC13_RS21785 Genome accession   NZ_CP150487
Coordinates   4148477..4149271 (-) Length   264 a.a.
NCBI ID   WP_003242676.1    Uniprot ID   C0SP91
Organism   Bacillus subtilis strain JNF2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4143477..4154271
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHC13_RS21760 (WHC13_21760) rocD 4143927..4145132 (-) 1206 WP_003242970.1 ornithine aminotransferase -
  WHC13_RS21765 (WHC13_21765) rocR 4145373..4146758 (+) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  WHC13_RS21770 (WHC13_21770) - 4146740..4146928 (-) 189 Protein_4236 ATP-binding protein -
  WHC13_RS21775 (WHC13_21775) - 4147045..4147173 (-) 129 WP_003242634.1 hypothetical protein -
  WHC13_RS21780 (WHC13_21780) htrA 4147193..4148395 (-) 1203 WP_009969578.1 serine protease HtrC Regulator
  WHC13_RS21785 (WHC13_21785) vicX 4148477..4149271 (-) 795 WP_003242676.1 MBL fold metallo-hydrolase Regulator
  WHC13_RS21790 (WHC13_21790) walI 4149293..4150135 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  WHC13_RS21795 (WHC13_21795) walH 4150122..4151489 (-) 1368 WP_003242498.1 WalRK two-component regulatory system regulator WalH -
  WHC13_RS21800 (WHC13_21800) walK 4151479..4153314 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  WHC13_RS21805 (WHC13_21805) walR 4153322..4154029 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29256.25 Da        Isoelectric Point: 5.8036

>NTDB_id=877226 WHC13_RS21785 WP_003242676.1 4148477..4149271(-) (vicX) [Bacillus subtilis strain JNF2]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=877226 WHC13_RS21785 WP_003242676.1 4148477..4149271(-) (vicX) [Bacillus subtilis strain JNF2]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0SP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53