Detailed information NTG0087709

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PszF2a_RS20260
• Genome accession: NZ_AP024722
• Coordinates: 4306684..4307970 (-)
• Length: 428 a.a.
• NCBI ID: WP_221292736.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain F2a
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4301684..4312970

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PszF2a_RS20245 (PszF2a_39670)	rpoH	4304034..4304888 (-)	855	WP_011914994.1	RNA polymerase sigma factor RpoH	-
PszF2a_RS20250 (PszF2a_39680)	ftsX	4305000..4306019 (-)	1020	WP_011914995.1	permease-like cell division protein FtsX	-
PszF2a_RS20255 (PszF2a_39690)	ftsE	4306019..4306687 (-)	669	WP_011914996.1	cell division ATP-binding protein FtsE	-
PszF2a_RS20260 (PszF2a_39700)	pilA	4306684..4307970 (-)	1287	WP_221292736.1	signal recognition particle-docking protein FtsY	Machinery gene
PszF2a_RS20265 (PszF2a_39710)	-	4308198..4309550 (+)	1353	WP_221292737.1	M16 family metallopeptidase	-
PszF2a_RS20270 (PszF2a_39720)	-	4309543..4311084 (+)	1542	WP_151320865.1	M16 family metallopeptidase	-
PszF2a_RS20275 (PszF2a_39730)	rsmD	4311084..4311701 (+)	618	WP_017244112.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PszF2a_RS20280 (PszF2a_39740)	-	4311695..4312099 (-)	405	WP_185776080.1	ribonucleotide reductase subunit alpha	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 45669.83 Da
• Isoelectric Point: 4.5631

>NTDB_id=87709 PszF2a_RS20260 WP_221292736.1 4306684..4307970(-) (pilA) [Stutzerimonas stutzeri strain F2a]
MFGSNDDKKTPAEPGEKKGLFGWLRKKPQPASAEQPATEPQADSEPVEQTVANVETPAATPQHEEPHAVEADLQPTEEIE
SPLPEPVPEPEPEPEPEPEPEPEPVSAPVVAATSEAPAKLGFFARLRQGLSKTSASIGEGMASLFLGKKAIDDDLLDELE
TRLLTADVGVEATTAIMQNLTRRVSRKELADSGALYTALQEELVGLLKPVEQPLAIDAGKRPYVILVVGVNGVGKTTTIG
KLAKKLQLDGKKVMLAAGDTFRAAAVEQLQVWGERNGIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKD
NLMEELKKVRRVMGKLDESAPHEVLLVLDAGTGQNAINQTRQFNQAVELTGLALTKLDGTAKGGVIFALAKQFGTPIRYI
GVGEGIDDLRTFEADAFVKALFAQREDA

Nucleotide

• Length: 1287 bp

>NTDB_id=87709 PszF2a_RS20260 WP_221292736.1 4306684..4307970(-) (pilA) [Stutzerimonas stutzeri strain F2a]
ATGTTTGGTTCCAACGACGACAAGAAGACGCCGGCCGAGCCCGGCGAGAAGAAAGGCCTGTTCGGCTGGCTGCGCAAGAA
GCCCCAGCCCGCTTCGGCAGAGCAGCCGGCTACCGAGCCTCAAGCGGACAGCGAACCGGTCGAGCAGACCGTGGCGAATG
TCGAAACGCCTGCCGCGACGCCGCAGCACGAGGAGCCTCACGCCGTCGAGGCCGATCTGCAGCCGACCGAGGAGATCGAG
TCGCCGCTGCCAGAGCCTGTACCCGAACCCGAACCCGAACCCGAACCCGAACCCGAACCCGAACCCGAGCCGGTATCTGC
CCCGGTCGTTGCGGCCACGTCGGAAGCGCCGGCTAAGCTCGGCTTCTTCGCTCGCCTGCGCCAGGGTCTGTCGAAGACCA
GCGCCAGCATCGGCGAAGGCATGGCCAGCCTGTTCCTCGGCAAGAAGGCCATCGACGACGATCTGCTCGACGAACTGGAA
ACCCGCCTGCTGACCGCCGACGTCGGCGTCGAGGCGACCACCGCGATCATGCAGAACCTCACCCGGCGCGTCTCGCGCAA
GGAGCTGGCCGACAGCGGCGCGCTCTACACCGCGCTGCAGGAGGAGCTCGTCGGCCTGCTCAAGCCGGTCGAGCAGCCGC
TGGCGATCGATGCCGGCAAGCGTCCCTACGTGATCCTGGTGGTCGGCGTGAACGGCGTCGGCAAGACCACCACCATCGGC
AAGCTGGCCAAGAAACTGCAACTCGACGGCAAGAAGGTCATGCTCGCCGCCGGTGACACCTTCCGCGCCGCAGCGGTTGA
GCAGCTGCAGGTGTGGGGCGAGCGCAACGGCATCCCGGTGATCGCCCAGCACACCGGCGCGGATTCCGCCTCGGTGATCT
TCGATGCCGTACAGGCCGCCAAGGCACGCGGCATCGACGTGCTGATCGCCGACACCGCCGGCCGCCTGCACACCAAGGAC
AACCTGATGGAAGAGCTGAAGAAGGTCCGCCGGGTGATGGGCAAGCTCGACGAGTCGGCGCCACATGAGGTGCTGCTGGT
GCTCGATGCCGGTACCGGACAGAACGCCATCAACCAGACCCGCCAGTTCAACCAGGCGGTCGAGCTGACCGGGCTTGCGC
TGACCAAGCTCGACGGCACCGCCAAGGGCGGCGTGATCTTCGCCCTGGCCAAGCAGTTCGGCACGCCGATCCGCTACATC
GGCGTAGGCGAAGGCATCGACGATCTGCGCACCTTCGAGGCCGATGCCTTCGTCAAGGCGCTGTTCGCTCAGCGGGAAGA
CGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (223-422)

• SRP54-type protein, helical bundle domain (SRP54_N) (138-203)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.119	97.897	0.491