Detailed information NTG0877078

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RHS40_RS09135
• Genome accession: NZ_CP133836
• Coordinates: 1960685..1961806 (+)
• Length: 373 a.a.
• NCBI ID: WP_005752146.1
• Uniprot ID: -
• Organism: Pasteurella multocida strain sample-B
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1955685..1966806

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RHS40_RS09115 (RHS40_09115)	napG	1957864..1958616 (+)	753	WP_005752143.1	ferredoxin-type protein NapG	-
RHS40_RS09120 (RHS40_09120)	napH	1958616..1959491 (+)	876	WP_198684251.1	quinol dehydrogenase ferredoxin subunit NapH	-
RHS40_RS09125 (RHS40_09125)	-	1959497..1959922 (+)	426	WP_005718380.1	nitrate reductase cytochrome c-type subunit	-
RHS40_RS09130 (RHS40_09130)	-	1959938..1960531 (+)	594	WP_005718382.1	cytochrome c3 family protein	-
RHS40_RS09135 (RHS40_09135)	dprA	1960685..1961806 (+)	1122	WP_005752146.1	DNA-processing protein DprA	Machinery gene
RHS40_RS09140 (RHS40_09140)	lptD	1961912..1964260 (-)	2349	WP_005752147.1	LPS assembly protein LptD	-
RHS40_RS09145 (RHS40_09145)	-	1964324..1964875 (-)	552	WP_005724442.1	DNA-3-methyladenine glycosylase I	-
RHS40_RS09150 (RHS40_09150)	tal	1965033..1965986 (+)	954	WP_005752148.1	transaldolase	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41494.69 Da
• Isoelectric Point: 6.2630

>NTDB_id=877078 RHS40_RS09135 WP_005752146.1 1960685..1961806(+) (dprA) [Pasteurella multocida strain sample-B]
MSSYLPLLLRLLQIPRLGSLAILHLLEHVSPAELMEYDTKAFQQIGWTAQQIQRWFTPENRYIDPALAWVNEQQHIVDWF
DPHYPPLLKQTEGAPLVLFVKGEVATLSAQQVAIVGSRHCSRYGEYWANYFATQLAYADIVVTSGLALGIDGFSHQAVVD
IHGKTIAVLGSGLEVIYPKKHRGLAEKIIENQGALVSEFLPFQPPVAENFPRRNRIISGLSLGTLVIEASEHSGSLITAR
YALEQNRDVFALPGQIQHGFSQGCHKLIKQGAILVESIQDILEHLSPYSHCAMPALPRTENAFSQQVTGTSTINTARITP
EHPELYAKIGYMPVSIDVLAQQVNLPIDTLLVQLLTLELQDLIVAENGLYQRK

Nucleotide

• Length: 1122 bp

>NTDB_id=877078 RHS40_RS09135 WP_005752146.1 1960685..1961806(+) (dprA) [Pasteurella multocida strain sample-B]
ATGTCATCTTATCTGCCTCTTTTATTACGTTTGTTACAAATTCCGCGTTTGGGTTCGCTGGCGATCCTGCATTTATTGGA
GCACGTCAGTCCAGCGGAATTAATGGAATATGATACAAAAGCCTTTCAACAGATAGGCTGGACGGCACAGCAGATTCAGC
GTTGGTTTACGCCTGAGAACCGTTATATTGATCCCGCGTTAGCCTGGGTAAACGAACAACAACATATTGTGGATTGGTTT
GATCCTCATTATCCTCCCTTGTTAAAGCAAACAGAAGGGGCACCACTTGTCTTGTTTGTGAAAGGGGAAGTGGCTACGCT
ATCTGCACAGCAAGTGGCGATCGTGGGCAGTCGTCATTGTTCGCGTTATGGGGAATACTGGGCAAACTATTTCGCCACCC
AACTGGCTTATGCCGATATTGTGGTGACCAGTGGTTTAGCGTTAGGTATTGATGGTTTCTCACATCAAGCAGTGGTGGAT
ATCCACGGGAAGACGATTGCAGTATTAGGCAGTGGTTTAGAGGTCATTTATCCGAAAAAACACCGAGGTTTAGCCGAAAA
AATTATTGAAAATCAAGGTGCGTTAGTGTCTGAATTTTTACCTTTCCAACCTCCTGTGGCAGAAAACTTTCCACGTCGTA
ATCGCATTATTAGTGGTTTGTCTTTGGGTACATTAGTCATTGAAGCCTCAGAACACAGTGGTTCTTTAATTACTGCCCGC
TATGCTTTAGAGCAAAATCGAGATGTTTTTGCGTTACCGGGGCAGATTCAGCATGGATTTAGCCAAGGTTGTCATAAACT
GATAAAACAGGGGGCAATATTAGTCGAAAGTATTCAGGATATTTTAGAACATCTCTCGCCTTATTCGCATTGTGCCATGC
CAGCGTTGCCTCGTACGGAGAACGCCTTTTCTCAACAAGTAACAGGCACATCAACCATCAATACTGCGCGGATAACGCCA
GAACATCCGGAATTATATGCCAAAATTGGCTATATGCCCGTCAGTATTGATGTATTAGCCCAACAAGTCAATCTACCTAT
TGATACCTTATTAGTACAGCTTTTAACCTTGGAATTGCAAGACTTGATTGTTGCTGAAAATGGATTATATCAGCGCAAAT
AA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (319-367)

• DNA recombination-mediator protein A (DNA_processg_A) (73-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	60.811	99.196	0.603
dprA	Glaesserella parasuis strain SC1401	52.571	93.834	0.493
dprA	Vibrio cholerae strain A1552	45.722	100	0.458
dprA	Vibrio campbellii strain DS40M4	45.405	99.196	0.45
dprA	Legionella pneumophila strain ERS1305867	40.162	99.464	0.399